scaffold8852 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold8852 |
489 |
577 |
+ |
GA-rich |
Low_complexity |
| scaffold8852 |
1171 |
1232 |
+ |
OPHELIA3_HV |
LTR/Gypsy |
| scaffold8852 |
2142 |
2746 |
+ |
Gypsy-16_Mad-I |
LTR/Gypsy |
| scaffold8852 |
2720 |
2746 |
+ |
Gypsy-16_Mad-I |
LTR/Gypsy |
| scaffold8852 |
3366 |
3547 |
+ |
GYPSHAN_I_MT-int |
LTR/Gypsy |
| scaffold8852 |
4885 |
5326 |
+ |
PL64 |
Unspecified |
| scaffold8852 |
5327 |
5646 |
- |
RS347 |
Unspecified |
| scaffold8852 |
5757 |
5841 |
+ |
LTR-2_MX-LTR |
LTR |
| scaffold8852 |
5880 |
5953 |
+ |
RS347 |
Unspecified |
| scaffold8852 |
6970 |
7090 |
+ |
(TTTTCTGAAA)n |
Simple_repeat |
| scaffold8852 |
7099 |
7181 |
+ |
(ATT)n |
Simple_repeat |
| scaffold8852 |
7183 |
7219 |
+ |
(GTAATT)n |
Simple_repeat |
| scaffold8852 |
7393 |
7430 |
+ |
(AAT)n |
Simple_repeat |
| scaffold8852 |
7446 |
7464 |
+ |
(A)n |
Simple_repeat |
| scaffold8852 |
7469 |
7545 |
+ |
(AAT)n |
Simple_repeat |
| scaffold8852 |
7551 |
7606 |
+ |
RS347 |
Unspecified |
| scaffold8852 |
7606 |
7673 |
+ |
RS347 |
Unspecified |
| scaffold8852 |
7674 |
7732 |
+ |
RS347 |
Unspecified |
| scaffold8852 |
8878 |
8960 |
+ |
(ATT)n |
Simple_repeat |
| scaffold8852 |
8962 |
8998 |
+ |
(GTAATT)n |
Simple_repeat |
| scaffold8852 |
9172 |
9209 |
+ |
(AAT)n |
Simple_repeat |
| scaffold8852 |
9225 |
9243 |
+ |
(A)n |
Simple_repeat |
| scaffold8852 |
9248 |
9327 |
+ |
(AAT)n |
Simple_repeat |
| scaffold8852 |
9344 |
9488 |
+ |
PL729 |
Unspecified |
| scaffold8852 |
10324 |
10422 |
- |
LINE1-36_SBi |
LINE/L1 |
| scaffold8852 |
10579 |
10665 |
- |
L1-3_ZM |
LINE/L1 |
| scaffold8852 |
10819 |
11607 |
- |
L1-1_PTr |
LINE/L1 |
| scaffold8852 |
11263 |
11313 |
+ |
(T)n |
Simple_repeat |
| scaffold8852 |
13947 |
14042 |
- |
EnSpm-34_SBi |
DNA/CMC-EnSpm |
| scaffold8852 |
14064 |
14169 |
+ |
(TCTGAAGTTT)n |
Simple_repeat |
| scaffold8852 |
14856 |
14900 |
+ |
(AATTTA)n |
Simple_repeat |
| scaffold8852 |
15075 |
15105 |
+ |
(T)n |
Simple_repeat |
| scaffold8852 |
15144 |
15217 |
+ |
(GATGAT)n |
Simple_repeat |
| scaffold8852 |
15389 |
15489 |
+ |
(AATTG)n |
Simple_repeat |
| scaffold8852 |
17169 |
17233 |
+ |
(A)n |
Simple_repeat |
| scaffold8852 |
17814 |
17840 |
+ |
GA-rich |
Low_complexity |
| scaffold8852 |
18268 |
18334 |
+ |
(T)n |
Simple_repeat |
| scaffold8852 |
18400 |
18504 |
+ |
RS622 |
Unspecified |
| scaffold8852 |
19281 |
19336 |
+ |
(ATT)n |
Simple_repeat |
| scaffold8852 |
19998 |
20158 |
+ |
RS7182 |
Unspecified |
| scaffold8852 |
21464 |
21710 |
+ |
RS7182 |
Unspecified |
| scaffold8852 |
21847 |
21888 |
+ |
(ATAT)n |
Simple_repeat |
| scaffold8852 |
22134 |
22233 |
+ |
LT1_EPa |
LTR? |
| scaffold8852 |
22444 |
22472 |
+ |
A-rich |
Low_complexity |
| scaffold8852 |
22610 |
22636 |
+ |
(T)n |
Simple_repeat |
| scaffold8852 |
22936 |
22991 |
+ |
Copia-2_BRa-I |
LTR/Copia |
| scaffold8852 |
23421 |
23562 |
+ |
RS1220 |
Unspecified |
| scaffold8852 |
23679 |
23737 |
- |
ATRAN |
DNA? |
| scaffold8852 |
24005 |
24037 |
+ |
(CCTC)n |
Simple_repeat |
| scaffold8852 |
24096 |
24141 |
+ |
(T)n |
Simple_repeat |
| scaffold8852 |
32200 |
32224 |
+ |
(T)n |
Simple_repeat |
| scaffold8852 |
32506 |
32847 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold8852 |
33047 |
33310 |
+ |
RS736 |
Unspecified |
| scaffold8852 |
33621 |
33688 |
+ |
(AATAG)n |
Simple_repeat |
| scaffold8852 |
34518 |
34604 |
- |
hAT-N16_ZM |
DNA/hAT-Ac |
| scaffold8852 |
34683 |
34762 |
+ |
(ATATT)n |
Simple_repeat |
| scaffold8852 |
35626 |
35699 |
+ |
TRAMET1 |
DNA/TcMar-Stowaway |
| scaffold8852 |
35860 |
35898 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold8852 |
35928 |
36025 |
+ |
L1-13_Mad |
LINE/L1 |
| scaffold8852 |
36863 |
36907 |
+ |
(T)n |
Simple_repeat |
| scaffold8852 |
37004 |
37056 |
+ |
(T)n |
Simple_repeat |
| scaffold8852 |
37004 |
37273 |
+ |
(T)n |
Simple_repeat |
| scaffold8852 |
37045 |
37273 |
- |
PL492 |
Unspecified |
| scaffold8852 |
37461 |
37754 |
+ |
(TT)n |
Simple_repeat |
| scaffold8852 |
37461 |
37506 |
+ |
(TT)n |
Simple_repeat |
| scaffold8852 |
37497 |
37754 |
+ |
RS18232 |
Unspecified |
| scaffold8852 |
37805 |
37823 |
+ |
(T)n |
Simple_repeat |
| scaffold8852 |
38259 |
38287 |
+ |
(ATA)n |
Simple_repeat |
| scaffold8852 |
41678 |
41704 |
+ |
(GCCT)n |
Simple_repeat |
| scaffold8852 |
42332 |
43102 |
- |
RS225 |
Unspecified |
| scaffold8852 |
43078 |
43821 |
+ |
RS166 |
Unspecified |
| scaffold8852 |
43824 |
44643 |
+ |
RS437 |
Unspecified |
| scaffold8852 |
44598 |
45456 |
+ |
RS256 |
Unspecified |
| scaffold8852 |
45461 |
46295 |
+ |
(TTTG)n |
Simple_repeat |
| scaffold8852 |
46253 |
46295 |
+ |
(TTTG)n |
Simple_repeat |
| scaffold8852 |
48153 |
48192 |
+ |
(GTTAGTT)n |
Simple_repeat |
| scaffold8852 |
48752 |
49525 |
- |
PL510 |
Unspecified |
| scaffold8852 |
49527 |
50547 |
+ |
RS934 |
Unspecified |
| scaffold8852 |
49781 |
50547 |
+ |
RS2725 |
Unspecified |
| scaffold8852 |
50700 |
51758 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |