scaffold8897 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold8897 |
2398 |
2588 |
- |
RS954 |
Unspecified |
| scaffold8897 |
2999 |
3031 |
+ |
(ATTA)n |
Simple_repeat |
| scaffold8897 |
3199 |
3262 |
+ |
(TTTTATA)n |
Simple_repeat |
| scaffold8897 |
3419 |
3552 |
+ |
(ATTTT)n |
Simple_repeat |
| scaffold8897 |
3692 |
3722 |
+ |
(TATTT)n |
Simple_repeat |
| scaffold8897 |
5333 |
5381 |
+ |
(TGATT)n |
Simple_repeat |
| scaffold8897 |
5959 |
6030 |
- |
POPGY1_LTR |
LTR/Gypsy |
| scaffold8897 |
6246 |
6315 |
+ |
(ATT)n |
Simple_repeat |
| scaffold8897 |
6672 |
6722 |
+ |
(TTA)n |
Simple_repeat |
| scaffold8897 |
10599 |
10628 |
+ |
(CATTT)n |
Simple_repeat |
| scaffold8897 |
10937 |
10983 |
+ |
(AATTTT)n |
Simple_repeat |
| scaffold8897 |
11260 |
11310 |
+ |
Gypsy-120_GM-I |
LTR/Gypsy |
| scaffold8897 |
12264 |
12312 |
+ |
(TGATT)n |
Simple_repeat |
| scaffold8897 |
12890 |
12961 |
- |
POPGY1_LTR |
LTR/Gypsy |
| scaffold8897 |
13177 |
13246 |
+ |
(ATT)n |
Simple_repeat |
| scaffold8897 |
13603 |
13653 |
+ |
(TTA)n |
Simple_repeat |
| scaffold8897 |
14277 |
14327 |
+ |
(ATTTTTG)n |
Simple_repeat |
| scaffold8897 |
14499 |
14552 |
+ |
RS750 |
Unspecified |
| scaffold8897 |
14703 |
14797 |
+ |
RS69 |
Unspecified |
| scaffold8897 |
14733 |
14898 |
+ |
RS4352 |
Unspecified |
| scaffold8897 |
14923 |
14968 |
+ |
(TAA)n |
Simple_repeat |
| scaffold8897 |
15024 |
16172 |
- |
RS265 |
Unspecified |
| scaffold8897 |
16537 |
16578 |
+ |
(ATTTA)n |
Simple_repeat |
| scaffold8897 |
17026 |
17058 |
+ |
(TAA)n |
Simple_repeat |
| scaffold8897 |
17399 |
17459 |
+ |
(TGTTCA)n |
Simple_repeat |
| scaffold8897 |
17481 |
17528 |
+ |
(TTTAATG)n |
Simple_repeat |
| scaffold8897 |
17632 |
18122 |
- |
RS875 |
Unspecified |
| scaffold8897 |
18166 |
18539 |
+ |
RS39 |
Unspecified |
| scaffold8897 |
18538 |
18798 |
- |
RS26 |
Unspecified |
| scaffold8897 |
18797 |
18958 |
+ |
RS39 |
Unspecified |
| scaffold8897 |
18954 |
19007 |
+ |
(CT)n |
Simple_repeat |
| scaffold8897 |
19008 |
19034 |
+ |
(AT)n |
Simple_repeat |
| scaffold8897 |
19206 |
19275 |
+ |
(ACC)n |
Simple_repeat |
| scaffold8897 |
20217 |
20271 |
+ |
(ATACG)n |
Simple_repeat |
| scaffold8897 |
20964 |
20993 |
+ |
(TA)n |
Simple_repeat |
| scaffold8897 |
21193 |
21248 |
+ |
(CAC)n |
Simple_repeat |
| scaffold8897 |
24088 |
24145 |
+ |
(ATACAT)n |
Simple_repeat |
| scaffold8897 |
24146 |
24158 |
+ |
(ATAC)n |
Simple_repeat |
| scaffold8897 |
27521 |
28842 |
- |
Atlantys1_I-int |
LTR/Gypsy |
| scaffold8897 |
29145 |
29245 |
- |
GypsI_I-int |
LTR/Gypsy |
| scaffold8897 |
29800 |
29856 |
- |
GypsI_I-int |
LTR/Gypsy |
| scaffold8897 |
31228 |
31775 |
- |
PL743 |
Unspecified |
| scaffold8897 |
31776 |
32301 |
- |
RS399 |
Unspecified |
| scaffold8897 |
32307 |
32559 |
- |
RS9854 |
Unspecified |
| scaffold8897 |
32737 |
32782 |
+ |
(AATAA)n |
Simple_repeat |
| scaffold8897 |
32783 |
32788 |
+ |
(AATATAA)n |
Simple_repeat |
| scaffold8897 |
33125 |
33159 |
+ |
(GGACCC)n |
Simple_repeat |
| scaffold8897 |
33171 |
33284 |
+ |
(CGGATC)n |
Simple_repeat |
| scaffold8897 |
34504 |
34525 |
+ |
(AG)n |
Simple_repeat |
| scaffold8897 |
34532 |
34582 |
+ |
(TTGTGTT)n |
Simple_repeat |
| scaffold8897 |
34872 |
34912 |
+ |
(CT)n |
Simple_repeat |
| scaffold8897 |
38253 |
38439 |
- |
RS12640 |
Unspecified |
| scaffold8897 |
38396 |
38593 |
- |
RS1717 |
Unspecified |
| scaffold8897 |
38545 |
38744 |
- |
RS1717 |
Unspecified |
| scaffold8897 |
38688 |
39157 |
- |
Copia-85_ST-I |
LTR/Copia |
| scaffold8897 |
39030 |
39157 |
- |
Copia-85_ST-I |
LTR/Copia |
| scaffold8897 |
39062 |
39128 |
- |
ATGP5A_I-int |
LTR/Gypsy |
| scaffold8897 |
39129 |
39179 |
- |
TWIFBIG |
DNA/hAT-Ac |
| scaffold8897 |
39311 |
40066 |
- |
ltr_Roo |
ltr_Roo(TransposonPSI) |
| scaffold8897 |
39476 |
40059 |
- |
Gypsy3-VV_I-int |
LTR/Gypsy |
| scaffold8897 |
41868 |
41942 |
- |
OPHELIA3_HV |
LTR/Gypsy |
| scaffold8897 |
43352 |
43387 |
+ |
(GAAAAA)n |
Simple_repeat |
| scaffold8897 |
43887 |
44548 |
- |
MEGY-I_MT |
LTR/Gypsy |
| scaffold8897 |
44638 |
45154 |
+ |
RS1930 |
Unspecified |
| scaffold8897 |
45164 |
45232 |
+ |
(GTT)n |
Simple_repeat |
| scaffold8897 |
45711 |
45875 |
- |
MEGY-I_MT |
LTR/Gypsy |
| scaffold8897 |
46500 |
46526 |
- |
Gypsy-16_Mad-I |
LTR/Gypsy |
| scaffold8897 |
46967 |
47008 |
+ |
(AACA)n |
Simple_repeat |
| scaffold8897 |
48260 |
48443 |
- |
CALYPSHAN2_I_MT-int |
LTR/Gypsy |
| scaffold8897 |
48533 |
49899 |
- |
Gypsy-5_Pru-I |
LTR/Gypsy |
| scaffold8897 |
51046 |
51107 |
+ |
(TTG)n |
Simple_repeat |
| scaffold8897 |
52419 |
52440 |
+ |
(AG)n |
Simple_repeat |
| scaffold8897 |
52447 |
52497 |
+ |
(TTGTGTT)n |
Simple_repeat |
| scaffold8897 |
52676 |
53306 |
- |
RS67 |
Unspecified |
| scaffold8897 |
52796 |
53454 |
- |
RS67 |
Unspecified |
| scaffold8897 |
52937 |
53534 |
- |
RS67 |
Unspecified |
| scaffold8897 |
53053 |
53680 |
- |
RS67 |
Unspecified |
| scaffold8897 |
53155 |
53827 |
- |
RS67 |
Unspecified |
| scaffold8897 |
53156 |
53753 |
- |
RS67 |
Unspecified |
| scaffold8897 |
53228 |
53900 |
- |
RS67 |
Unspecified |
| scaffold8897 |
53422 |
54047 |
- |
RS67 |
Unspecified |
| scaffold8897 |
54273 |
54341 |
- |
MarinerL-1_CR |
DNA/TcMar? |
| scaffold8897 |
54868 |
54912 |
+ |
A-rich |
Low_complexity |
| scaffold8897 |
55224 |
55274 |
+ |
(CTCAA)n |
Simple_repeat |
| scaffold8897 |
56302 |
56429 |
+ |
(TAT)n |
Simple_repeat |
| scaffold8897 |
56531 |
56602 |
- |
Gypsy-193_ZM-I |
LTR/Gypsy |
| scaffold8897 |
56760 |
57103 |
- |
RS5129 |
Unspecified |
| scaffold8897 |
57563 |
57598 |
+ |
(AATT)n |
Simple_repeat |
| scaffold8897 |
57654 |
57695 |
+ |
A-rich |
Low_complexity |
| scaffold8897 |
58484 |
58639 |
- |
RS116 |
Unspecified |
| scaffold8897 |
59178 |
59225 |
+ |
(TAA)n |
Simple_repeat |
| scaffold8897 |
59694 |
59752 |
+ |
(CTT)n |
Simple_repeat |
| scaffold8897 |
60687 |
60731 |
+ |
A-rich |
Low_complexity |
| scaffold8897 |
60804 |
61663 |
+ |
RS443 |
Unspecified |
| scaffold8897 |
61105 |
62023 |
+ |
RS11 |
Unspecified |
| scaffold8897 |
62079 |
62095 |
+ |
(T)n |
Simple_repeat |
| scaffold8897 |
62347 |
63845 |
+ |
RS3148 |
Unspecified |
| scaffold8897 |
64525 |
64846 |
- |
RS8781 |
Unspecified |
| scaffold8897 |
65688 |
65766 |
+ |
Atlantys1_I-int |
LTR/Gypsy |