scaffold8949 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold8949 |
49 |
204 |
- |
RS1777 |
Unspecified |
| scaffold8949 |
300 |
639 |
- |
RS2939 |
Unspecified |
| scaffold8949 |
1656 |
3036 |
- |
L1-5_STu |
LINE/L1 |
| scaffold8949 |
3119 |
3163 |
- |
LINE1-24_ZM |
LINE/L1 |
| scaffold8949 |
3250 |
3312 |
- |
SHALINE10_MT |
LINE/L1 |
| scaffold8949 |
3467 |
3611 |
- |
Gypsy-25_VV-I |
LTR/Gypsy |
| scaffold8949 |
3791 |
3939 |
- |
L1-7_Mad |
LINE/L1 |
| scaffold8949 |
4944 |
5254 |
+ |
EnSpm-11_STu |
DNA/CMC-EnSpm |
| scaffold8949 |
5621 |
5647 |
+ |
(T)n |
Simple_repeat |
| scaffold8949 |
6051 |
6067 |
+ |
(A)n |
Simple_repeat |
| scaffold8949 |
6276 |
6444 |
- |
RS441 |
Unspecified |
| scaffold8949 |
6530 |
6567 |
+ |
(ACC)n |
Simple_repeat |
| scaffold8949 |
7022 |
7055 |
+ |
(T)n |
Simple_repeat |
| scaffold8949 |
9017 |
9099 |
+ |
LTR-7_Mad-LTR |
LTR |
| scaffold8949 |
9329 |
9350 |
+ |
(CA)n |
Simple_repeat |
| scaffold8949 |
9775 |
9805 |
+ |
(GTT)n |
Simple_repeat |
| scaffold8949 |
10586 |
10734 |
+ |
RS347 |
Unspecified |
| scaffold8949 |
11200 |
11330 |
+ |
RS3701 |
Unspecified |
| scaffold8949 |
11953 |
12038 |
+ |
A-rich |
Low_complexity |
| scaffold8949 |
12055 |
12132 |
+ |
(ATTATC)n |
Simple_repeat |
| scaffold8949 |
12232 |
12271 |
+ |
(ATCATT)n |
Simple_repeat |
| scaffold8949 |
12436 |
12607 |
- |
RS11347 |
Unspecified |
| scaffold8949 |
12751 |
12830 |
+ |
(T)n |
Simple_repeat |
| scaffold8949 |
12889 |
12989 |
- |
RS8606 |
Unspecified |
| scaffold8949 |
13001 |
13245 |
- |
RS8606 |
Unspecified |
| scaffold8949 |
13439 |
13573 |
- |
RS4639 |
Unspecified |
| scaffold8949 |
13762 |
13786 |
+ |
(CATTT)n |
Simple_repeat |
| scaffold8949 |
13936 |
14009 |
+ |
RS43 |
Unspecified |
| scaffold8949 |
14726 |
14935 |
- |
RS5435 |
Unspecified |
| scaffold8949 |
14818 |
14935 |
- |
RS1008 |
Unspecified |
| scaffold8949 |
15359 |
15481 |
+ |
Copia-75_ST-I |
LTR/Copia |
| scaffold8949 |
15486 |
15531 |
+ |
RS1458 |
Unspecified |
| scaffold8949 |
15573 |
15659 |
+ |
Copia-75_ST-I |
LTR/Copia |
| scaffold8949 |
16252 |
16594 |
- |
RS9410 |
Unspecified |
| scaffold8949 |
17737 |
17853 |
- |
TWIF |
DNA/hAT-Ac |
| scaffold8949 |
18350 |
18422 |
+ |
(CGTGC)n |
Simple_repeat |
| scaffold8949 |
18542 |
18561 |
+ |
(T)n |
Simple_repeat |
| scaffold8949 |
19217 |
19514 |
- |
RS342 |
Unspecified |
| scaffold8949 |
19586 |
19928 |
- |
RS9410 |
Unspecified |
| scaffold8949 |
20567 |
20872 |
- |
RS14906 |
Unspecified |
| scaffold8949 |
20879 |
21061 |
- |
RS178 |
Unspecified |
| scaffold8949 |
21580 |
21631 |
+ |
(T)n |
Simple_repeat |
| scaffold8949 |
22226 |
22263 |
+ |
(ACTTTAA)n |
Simple_repeat |
| scaffold8949 |
23174 |
23516 |
- |
RS9410 |
Unspecified |
| scaffold8949 |
24959 |
24993 |
+ |
(ACTTGTG)n |
Simple_repeat |
| scaffold8949 |
26208 |
26471 |
+ |
RS10557 |
Unspecified |
| scaffold8949 |
27669 |
27756 |
+ |
Gypsy-72-LTR_ZM |
LTR/Gypsy |
| scaffold8949 |
27857 |
27916 |
- |
RS15131 |
Unspecified |
| scaffold8949 |
27868 |
28172 |
- |
RS9490 |
Unspecified |
| scaffold8949 |
28400 |
28565 |
+ |
(ATCTGAAGTT)n |
Simple_repeat |