scaffold8965 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold8965 |
8 |
261 |
- |
RS15332 |
Unspecified |
| scaffold8965 |
2831 |
3034 |
+ |
RS549 |
Unspecified |
| scaffold8965 |
3252 |
3274 |
+ |
(A)n |
Simple_repeat |
| scaffold8965 |
3419 |
3440 |
+ |
(ATGA)n |
Simple_repeat |
| scaffold8965 |
8345 |
8441 |
+ |
A-rich |
Low_complexity |
| scaffold8965 |
9225 |
9267 |
+ |
(TATT)n |
Simple_repeat |
| scaffold8965 |
10398 |
10439 |
+ |
(TGG)n |
Simple_repeat |
| scaffold8965 |
10698 |
10835 |
- |
RS4 |
Unspecified |
| scaffold8965 |
10832 |
10969 |
+ |
RS1213 |
Unspecified |
| scaffold8965 |
11128 |
11174 |
+ |
(TTTTT)n |
Simple_repeat |
| scaffold8965 |
11176 |
11216 |
+ |
(AT)n |
Simple_repeat |
| scaffold8965 |
11447 |
11485 |
+ |
(AAATTA)n |
Simple_repeat |
| scaffold8965 |
11619 |
11841 |
+ |
(TCCGG)n |
Simple_repeat |
| scaffold8965 |
11850 |
11962 |
+ |
RS1213 |
Unspecified |
| scaffold8965 |
12230 |
12363 |
- |
RS10 |
Unspecified |
| scaffold8965 |
12319 |
12369 |
+ |
RS10 |
Unspecified |
| scaffold8965 |
12562 |
12592 |
+ |
(A)n |
Simple_repeat |
| scaffold8965 |
12614 |
12799 |
+ |
PL700 |
Unspecified |
| scaffold8965 |
12796 |
12877 |
- |
RS908 |
Unspecified |
| scaffold8965 |
12876 |
13021 |
- |
PL565 |
Unspecified |
| scaffold8965 |
13102 |
13127 |
+ |
(ATTT)n |
Simple_repeat |
| scaffold8965 |
13214 |
13261 |
+ |
(AGTTGTT)n |
Simple_repeat |
| scaffold8965 |
13437 |
13523 |
+ |
Gypsy-72_GM-I |
LTR/Gypsy |
| scaffold8965 |
14106 |
14157 |
+ |
(CTGAA)n |
Simple_repeat |
| scaffold8965 |
14189 |
14252 |
+ |
(CTGAA)n |
Simple_repeat |
| scaffold8965 |
14329 |
14605 |
- |
RS1716 |
Unspecified |
| scaffold8965 |
14621 |
15155 |
+ |
A-rich |
Low_complexity |
| scaffold8965 |
15071 |
15155 |
+ |
A-rich |
Low_complexity |
| scaffold8965 |
15304 |
15416 |
- |
RS4 |
Unspecified |
| scaffold8965 |
15855 |
16019 |
- |
RS441 |
Unspecified |
| scaffold8965 |
16561 |
16604 |
+ |
(TTACTAA)n |
Simple_repeat |
| scaffold8965 |
16959 |
17002 |
+ |
(T)n |
Simple_repeat |
| scaffold8965 |
17244 |
17451 |
- |
RS10706 |
Unspecified |
| scaffold8965 |
18260 |
18292 |
+ |
A-rich |
Low_complexity |
| scaffold8965 |
19008 |
19055 |
+ |
(ATCCGAA)n |
Simple_repeat |
| scaffold8965 |
19321 |
19353 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold8965 |
19733 |
19763 |
+ |
(ATAA)n |
Simple_repeat |
| scaffold8965 |
20004 |
20050 |
+ |
(T)n |
Simple_repeat |
| scaffold8965 |
20642 |
20970 |
+ |
RS63 |
Unspecified |
| scaffold8965 |
21181 |
21623 |
+ |
RS1814 |
Unspecified |
| scaffold8965 |
21975 |
22158 |
+ |
RS1848 |
Unspecified |
| scaffold8965 |
21976 |
22184 |
+ |
RS1 |
Unspecified |
| scaffold8965 |
22490 |
22548 |
+ |
(TATCGGA)n |
Simple_repeat |
| scaffold8965 |
22582 |
22923 |
+ |
RS63 |
Unspecified |
| scaffold8965 |
27983 |
28011 |
+ |
A-rich |
Low_complexity |
| scaffold8965 |
29637 |
29676 |
+ |
(AACCAT)n |
Simple_repeat |
| scaffold8965 |
29898 |
29957 |
+ |
GA-rich |
Low_complexity |
| scaffold8965 |
29970 |
29998 |
+ |
(GGT)n |
Simple_repeat |
| scaffold8965 |
30406 |
30459 |
+ |
(ATTTTT)n |
Simple_repeat |
| scaffold8965 |
30566 |
30585 |
+ |
(TAAA)n |
Simple_repeat |
| scaffold8965 |
31027 |
31798 |
- |
Copia-32-I_VV |
LTR/Copia |
| scaffold8965 |
32119 |
32297 |
+ |
RS5 |
Unspecified |
| scaffold8965 |
32544 |
32663 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold8965 |
32689 |
32781 |
+ |
(ATT)n |
Simple_repeat |
| scaffold8965 |
32787 |
33242 |
+ |
(TAA)n |
Simple_repeat |
| scaffold8965 |
32794 |
33242 |
+ |
(TAA)n |
Simple_repeat |
| scaffold8965 |
32878 |
33242 |
+ |
(TAA)n |
Simple_repeat |
| scaffold8965 |
33259 |
33405 |
+ |
(GTTCA)n |
Simple_repeat |
| scaffold8965 |
34078 |
34330 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold8965 |
37079 |
37102 |
+ |
(T)n |
Simple_repeat |
| scaffold8965 |
37119 |
37298 |
- |
RS1542 |
Unspecified |
| scaffold8965 |
40556 |
40585 |
+ |
(TTC)n |
Simple_repeat |
| scaffold8965 |
43001 |
43082 |
+ |
(TAT)n |
Simple_repeat |
| scaffold8965 |
43239 |
43424 |
- |
RS202 |
Unspecified |
| scaffold8965 |
43419 |
43635 |
+ |
RS2339 |
Unspecified |
| scaffold8965 |
45296 |
45536 |
- |
Copia-75_ST-I |
LTR/Copia |
| scaffold8965 |
45296 |
45429 |
- |
Copia-75_ST-I |
LTR/Copia |
| scaffold8965 |
45412 |
45536 |
- |
RS1458 |
Unspecified |
| scaffold8965 |
45443 |
45550 |
- |
RS5389 |
Unspecified |
| scaffold8965 |
45676 |
45762 |
- |
Copia-75_ST-I |
LTR/Copia |
| scaffold8965 |
46180 |
46210 |
+ |
(A)n |
Simple_repeat |
| scaffold8965 |
46316 |
46355 |
+ |
(GCCACC)n |
Simple_repeat |
| scaffold8965 |
46671 |
46912 |
+ |
RS445 |
Unspecified |
| scaffold8965 |
47236 |
47254 |
+ |
(A)n |
Simple_repeat |
| scaffold8965 |
47720 |
47751 |
+ |
(T)n |
Simple_repeat |
| scaffold8965 |
48945 |
48974 |
+ |
(TATC)n |
Simple_repeat |
| scaffold8965 |
49083 |
49351 |
- |
RS10 |
Unspecified |
| scaffold8965 |
49312 |
49370 |
+ |
RS17699 |
Unspecified |
| scaffold8965 |
49986 |
50029 |
+ |
(TTTTTA)n |
Simple_repeat |
| scaffold8965 |
51748 |
51778 |
+ |
A-rich |
Low_complexity |
| scaffold8965 |
52203 |
52253 |
+ |
G-rich |
Low_complexity |
| scaffold8965 |
53896 |
53936 |
+ |
(AATAA)n |
Simple_repeat |
| scaffold8965 |
56147 |
56185 |
+ |
G-rich |
Low_complexity |
| scaffold8965 |
57139 |
57201 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold8965 |
57332 |
57448 |
- |
RS11420 |
Unspecified |
| scaffold8965 |
58302 |
58480 |
+ |
RS347 |
Unspecified |
| scaffold8965 |
59070 |
59110 |
+ |
(T)n |
Simple_repeat |
| scaffold8965 |
59255 |
59280 |
+ |
(ATA)n |
Simple_repeat |
| scaffold8965 |
59365 |
59777 |
- |
RS548 |
Unspecified |
| scaffold8965 |
59772 |
60188 |
+ |
RS7517 |
Unspecified |
| scaffold8965 |
60626 |
60980 |
- |
RS548 |
Unspecified |
| scaffold8965 |
62349 |
62530 |
- |
RS326 |
Unspecified |
| scaffold8965 |
62530 |
62760 |
+ |
RS846 |
Unspecified |
| scaffold8965 |
62765 |
63037 |
- |
RS202 |
Unspecified |
| scaffold8965 |
64197 |
64311 |
+ |
(A)n |
Simple_repeat |
| scaffold8965 |
65449 |
65738 |
- |
RS12928 |
Unspecified |
| scaffold8965 |
66383 |
66530 |
+ |
RS15747 |
Unspecified |
| scaffold8965 |
67241 |
67287 |
+ |
(T)n |
Simple_repeat |
| scaffold8965 |
67884 |
67916 |
+ |
(TTTTGA)n |
Simple_repeat |
| scaffold8965 |
70626 |
70677 |
+ |
(TTTC)n |
Simple_repeat |
| scaffold8965 |
71961 |
72107 |
+ |
RS79 |
Unspecified |
| scaffold8965 |
72717 |
73006 |
- |
RS12928 |
Unspecified |
| scaffold8965 |
73630 |
73777 |
+ |
RS15747 |
Unspecified |
| scaffold8965 |
76313 |
76445 |
- |
TRAMET1 |
DNA/TcMar-Stowaway |
| scaffold8965 |
77076 |
77094 |
+ |
(GGT)n |
Simple_repeat |
| scaffold8965 |
84142 |
84196 |
+ |
(GACCCA)n |
Simple_repeat |
| scaffold8965 |
84306 |
84453 |
+ |
RS2875 |
Unspecified |
| scaffold8965 |
84517 |
84588 |
+ |
OGRE-I_PS |
LTR/Gypsy |
| scaffold8965 |
84617 |
84638 |
+ |
(T)n |
Simple_repeat |
| scaffold8965 |
84678 |
84732 |
+ |
(ACCCAT)n |
Simple_repeat |
| scaffold8965 |
84768 |
84799 |
+ |
G-rich |
Low_complexity |
| scaffold8965 |
84902 |
85044 |
+ |
RS452 |
Unspecified |
| scaffold8965 |
86252 |
86290 |
+ |
A-rich |
Low_complexity |
| scaffold8965 |
90017 |
90068 |
+ |
(AAGATG)n |
Simple_repeat |
| scaffold8965 |
91487 |
91572 |
+ |
A-rich |
Low_complexity |
| scaffold8965 |
92086 |
92264 |
- |
SINE2-1_TAe |
SINE/tRNA |
| scaffold8965 |
93344 |
93375 |
+ |
(CAATT)n |
Simple_repeat |
| scaffold8965 |
93424 |
93457 |
+ |
(AATTTC)n |
Simple_repeat |
| scaffold8965 |
93719 |
94070 |
+ |
RS311 |
Unspecified |
| scaffold8965 |
93775 |
94137 |
- |
RS8 |
Unspecified |
| scaffold8965 |
94261 |
94968 |
+ |
(ATTTT)n |
Simple_repeat |
| scaffold8965 |
94937 |
94968 |
+ |
(ATTTT)n |
Simple_repeat |
| scaffold8965 |
95395 |
95420 |
+ |
(ATTA)n |
Simple_repeat |
| scaffold8965 |
95418 |
95551 |
+ |
RS3312 |
Unspecified |
| scaffold8965 |
95679 |
96140 |
+ |
RS10619 |
Unspecified |
| scaffold8965 |
96195 |
96542 |
+ |
RS4076 |
Unspecified |
| scaffold8965 |
96539 |
96581 |
+ |
(TTTTATA)n |
Simple_repeat |
| scaffold8965 |
96780 |
96804 |
+ |
(TATTT)n |
Simple_repeat |
| scaffold8965 |
97028 |
97067 |
+ |
A-rich |
Low_complexity |
| scaffold8965 |
97261 |
97277 |
+ |
GA-rich |
Low_complexity |
| scaffold8965 |
97278 |
97309 |
+ |
A-rich |
Low_complexity |
| scaffold8965 |
97437 |
97578 |
+ |
RS1736 |
Unspecified |
| scaffold8965 |
97643 |
98003 |
+ |
PL619 |
Unspecified |
| scaffold8965 |
98128 |
98191 |
+ |
(ATA)n |
Simple_repeat |
| scaffold8965 |
99076 |
99305 |
- |
RS5729 |
Unspecified |
| scaffold8965 |
99347 |
99368 |
+ |
GA-rich |
Low_complexity |
| scaffold8965 |
99369 |
99534 |
+ |
A-rich |
Low_complexity |
| scaffold8965 |
99703 |
100033 |
- |
RS11952 |
Unspecified |
| scaffold8965 |
100156 |
100180 |
+ |
(T)n |
Simple_repeat |
| scaffold8965 |
100355 |
100397 |
+ |
(ATT)n |
Simple_repeat |
| scaffold8965 |
101288 |
101449 |
- |
RS2719 |
Unspecified |
| scaffold8965 |
104004 |
104048 |
+ |
(ATTAA)n |
Simple_repeat |
| scaffold8965 |
104536 |
104932 |
+ |
RS14425 |
Unspecified |
| scaffold8965 |
105023 |
105125 |
+ |
RS11808 |
Unspecified |
| scaffold8965 |
105497 |
105548 |
+ |
(AATTAC)n |
Simple_repeat |
| scaffold8965 |
105674 |
105709 |
+ |
(A)n |
Simple_repeat |
| scaffold8965 |
105745 |
105950 |
- |
RS5381 |
Unspecified |
| scaffold8965 |
106257 |
106308 |
+ |
(TTTAA)n |
Simple_repeat |
| scaffold8965 |
106333 |
106363 |
+ |
(A)n |
Simple_repeat |
| scaffold8965 |
106566 |
106749 |
+ |
RS10214 |
Unspecified |
| scaffold8965 |
106778 |
106955 |
+ |
RS5 |
Unspecified |
| scaffold8965 |
108069 |
108103 |
+ |
(T)n |
Simple_repeat |
| scaffold8965 |
108398 |
108428 |
+ |
(TTTAT)n |
Simple_repeat |
| scaffold8965 |
108833 |
109154 |
- |
PL923 |
Unspecified |
| scaffold8965 |
109689 |
109728 |
+ |
(AAT)n |
Simple_repeat |
| scaffold8965 |
109942 |
110224 |
- |
PL736 |
Unspecified |
| scaffold8965 |
110177 |
110462 |
- |
PL736 |
Unspecified |
| scaffold8965 |
110227 |
110561 |
+ |
PL915 |
Unspecified |
| scaffold8965 |
110597 |
110648 |
+ |
(TTTAA)n |
Simple_repeat |
| scaffold8965 |
110597 |
111338 |
+ |
(TTTAA)n |
Simple_repeat |
| scaffold8965 |
110625 |
111338 |
- |
PL969 |
Unspecified |
| scaffold8965 |
111458 |
111497 |
+ |
(GTGAATA)n |
Simple_repeat |
| scaffold8965 |
113520 |
113573 |
+ |
(A)n |
Simple_repeat |
| scaffold8965 |
114262 |
115176 |
- |
PL445 |
Unspecified |