scaffold9045 Repeat List
genome |
start |
end |
strand |
repeat-name |
repeat-class |
scaffold9045 |
1 |
233 |
+ |
RS1085 |
Unspecified |
scaffold9045 |
283 |
399 |
+ |
RS13928 |
Unspecified |
scaffold9045 |
491 |
539 |
+ |
(A)n |
Simple_repeat |
scaffold9045 |
1287 |
1303 |
+ |
(A)n |
Simple_repeat |
scaffold9045 |
1560 |
1674 |
+ |
(CTTCAGA)n |
Simple_repeat |
scaffold9045 |
2648 |
2714 |
+ |
RS727 |
Unspecified |
scaffold9045 |
3127 |
3239 |
+ |
(GGT)n |
Simple_repeat |
scaffold9045 |
3459 |
3649 |
- |
RS17573 |
Unspecified |
scaffold9045 |
3639 |
3816 |
+ |
RS736 |
Unspecified |
scaffold9045 |
4191 |
4292 |
+ |
RS2613 |
Unspecified |
scaffold9045 |
4290 |
4704 |
- |
Copia-82_GM-I |
LTR/Copia |
scaffold9045 |
7342 |
7367 |
+ |
(T)n |
Simple_repeat |
scaffold9045 |
7545 |
7571 |
+ |
(T)n |
Simple_repeat |
scaffold9045 |
10123 |
10150 |
+ |
(ATTTT)n |
Simple_repeat |
scaffold9045 |
10635 |
10678 |
+ |
RS1258 |
Unspecified |
scaffold9045 |
15146 |
15177 |
+ |
(T)n |
Simple_repeat |
scaffold9045 |
15450 |
15467 |
+ |
(T)n |
Simple_repeat |
scaffold9045 |
15813 |
15877 |
+ |
A-rich |
Low_complexity |
scaffold9045 |
16129 |
16449 |
- |
RS2543 |
Unspecified |
scaffold9045 |
16178 |
16445 |
- |
PL688 |
Unspecified |
scaffold9045 |
17305 |
17364 |
+ |
(AATTAT)n |
Simple_repeat |
scaffold9045 |
18772 |
18797 |
+ |
(TTA)n |
Simple_repeat |
scaffold9045 |
19144 |
19277 |
- |
RS15118 |
Unspecified |
scaffold9045 |
19159 |
19255 |
- |
RS4475 |
Unspecified |
scaffold9045 |
19275 |
19386 |
+ |
RS4475 |
Unspecified |
scaffold9045 |
19277 |
19370 |
- |
RS16382 |
Unspecified |
scaffold9045 |
19439 |
19484 |
+ |
(AAT)n |
Simple_repeat |
scaffold9045 |
19785 |
19817 |
+ |
A-rich |
Low_complexity |
scaffold9045 |
20533 |
20716 |
+ |
RS178 |
Unspecified |
scaffold9045 |
21283 |
21317 |
+ |
GA-rich |
Low_complexity |
scaffold9045 |
21385 |
21432 |
+ |
(CCACTA)n |
Simple_repeat |
scaffold9045 |
21614 |
21659 |
+ |
(TTG)n |
Simple_repeat |
scaffold9045 |
21860 |
21896 |
+ |
(GTT)n |
Simple_repeat |
scaffold9045 |
21982 |
22013 |
+ |
(GGAAGT)n |
Simple_repeat |
scaffold9045 |
23681 |
23786 |
- |
RS1049 |
Unspecified |
scaffold9045 |
24015 |
24061 |
+ |
(ACCCGAA)n |
Simple_repeat |
scaffold9045 |
24257 |
24299 |
+ |
(GACCC)n |
Simple_repeat |
scaffold9045 |
24338 |
24379 |
+ |
(CCGAT)n |
Simple_repeat |
scaffold9045 |
26490 |
26863 |
- |
PL261 |
Unspecified |
scaffold9045 |
26866 |
27318 |
- |
PL2 |
Unspecified |
scaffold9045 |
27354 |
27415 |
- |
PL567 |
Unspecified |
scaffold9045 |
29847 |
29906 |
- |
ATCopia24I |
LTR/Copia |
scaffold9045 |
30255 |
30421 |
+ |
RS18 |
Unspecified |
scaffold9045 |
30887 |
30951 |
+ |
(A)n |
Simple_repeat |
scaffold9045 |
31355 |
31398 |
+ |
A-rich |
Low_complexity |
scaffold9045 |
31456 |
31545 |
+ |
RS3146 |
Unspecified |
scaffold9045 |
31683 |
31713 |
+ |
(ATTTCA)n |
Simple_repeat |
scaffold9045 |
32075 |
32308 |
- |
RS4007 |
Unspecified |
scaffold9045 |
32652 |
32704 |
+ |
(TCA)n |
Simple_repeat |
scaffold9045 |
32992 |
33179 |
+ |
(TTCAG)n |
Simple_repeat |
scaffold9045 |
33274 |
33361 |
+ |
(ATA)n |
Simple_repeat |
scaffold9045 |
36429 |
36468 |
+ |
(CT)n |
Simple_repeat |
scaffold9045 |
38441 |
38478 |
+ |
A-rich |
Low_complexity |
scaffold9045 |
38477 |
38521 |
+ |
(AATTAC)n |
Simple_repeat |
scaffold9045 |
38532 |
38549 |
+ |
(A)n |
Simple_repeat |
scaffold9045 |
39838 |
39985 |
- |
PL9 |
Unspecified |
scaffold9045 |
40036 |
40371 |
+ |
RS11001 |
Unspecified |
scaffold9045 |
40601 |
40628 |
+ |
(A)n |
Simple_repeat |
scaffold9045 |
40958 |
40999 |
- |
RS10491 |
Unspecified |
scaffold9045 |
41619 |
41680 |
+ |
(TCA)n |
Simple_repeat |
scaffold9045 |
43698 |
43744 |
+ |
(TCAGC)n |
Simple_repeat |
scaffold9045 |
44551 |
44575 |
+ |
(ATTT)n |
Simple_repeat |
scaffold9045 |
44580 |
44611 |
+ |
(A)n |
Simple_repeat |
scaffold9045 |
45966 |
46168 |
+ |
RS365 |
Unspecified |
scaffold9045 |
46170 |
46244 |
+ |
(ATT)n |
Simple_repeat |
scaffold9045 |
46286 |
46426 |
+ |
(CAGCT)n |
Simple_repeat |
scaffold9045 |
47548 |
47593 |
+ |
A-rich |
Low_complexity |
scaffold9045 |
48008 |
48049 |
+ |
(TTTGA)n |
Simple_repeat |
scaffold9045 |
48103 |
48144 |
+ |
(TGATTTT)n |
Simple_repeat |
scaffold9045 |
51566 |
51605 |
+ |
(TTACTTT)n |
Simple_repeat |
scaffold9045 |
52635 |
52787 |
+ |
RS16043 |
Unspecified |
scaffold9045 |
54349 |
54583 |
+ |
RS17653 |
Unspecified |
scaffold9045 |
54607 |
55262 |
+ |
RS15900 |
Unspecified |
scaffold9045 |
55761 |
55981 |
+ |
RS14549 |
Unspecified |
scaffold9045 |
56016 |
56270 |
+ |
RS11110 |
Unspecified |
scaffold9045 |
56287 |
56354 |
+ |
(TAA)n |
Simple_repeat |
scaffold9045 |
56501 |
56517 |
+ |
(T)n |
Simple_repeat |
scaffold9045 |
56526 |
56566 |
+ |
(GATTT)n |
Simple_repeat |
scaffold9045 |
57585 |
57624 |
+ |
(TTACTTT)n |
Simple_repeat |
scaffold9045 |
58654 |
58806 |
+ |
RS16043 |
Unspecified |
scaffold9045 |
60299 |
60533 |
+ |
RS17653 |
Unspecified |
scaffold9045 |
60557 |
61212 |
+ |
RS15900 |
Unspecified |
scaffold9045 |
61711 |
61931 |
+ |
RS14549 |
Unspecified |
scaffold9045 |
61966 |
62220 |
+ |
RS11110 |
Unspecified |
scaffold9045 |
62237 |
62304 |
+ |
(TAA)n |
Simple_repeat |
scaffold9045 |
62451 |
62467 |
+ |
(T)n |
Simple_repeat |
scaffold9045 |
62730 |
62761 |
+ |
(T)n |
Simple_repeat |
scaffold9045 |
62872 |
63527 |
+ |
RS15900 |
Unspecified |
scaffold9045 |
64093 |
64314 |
+ |
RS14549 |
Unspecified |
scaffold9045 |
64382 |
64619 |
+ |
RS11110 |
Unspecified |
scaffold9045 |
64644 |
64694 |
+ |
A-rich |
Low_complexity |
scaffold9045 |
64860 |
64891 |
+ |
A-rich |
Low_complexity |
scaffold9045 |
66597 |
66620 |
+ |
(A)n |
Simple_repeat |
scaffold9045 |
68589 |
68605 |
+ |
(TTG)n |
Simple_repeat |
scaffold9045 |
69542 |
69547 |
+ |
(TGT)n |
Simple_repeat |
scaffold9045 |
69548 |
69571 |
+ |
(T)n |
Simple_repeat |
scaffold9045 |
69572 |
69578 |
+ |
(TGT)n |
Simple_repeat |
scaffold9045 |
70161 |
70208 |
+ |
(CAGTT)n |
Simple_repeat |
scaffold9045 |
71702 |
71953 |
+ |
A-rich |
Low_complexity |
scaffold9045 |
75111 |
75137 |
+ |
(CCACCG)n |
Simple_repeat |
scaffold9045 |
75391 |
75459 |
- |
ATCopia24I |
LTR/Copia |
scaffold9045 |
76318 |
76347 |
+ |
(AGTC)n |
Simple_repeat |
scaffold9045 |
76882 |
76925 |
- |
RS3535 |
Unspecified |
scaffold9045 |
77810 |
77834 |
+ |
(T)n |
Simple_repeat |
scaffold9045 |
78009 |
78150 |
+ |
RS115 |
Unspecified |
scaffold9045 |
78412 |
78450 |
+ |
(TAT)n |
Simple_repeat |
scaffold9045 |
79292 |
79431 |
- |
RS11020 |
Unspecified |
scaffold9045 |
79479 |
79592 |
- |
RS1 |
Unspecified |
scaffold9045 |
79591 |
79641 |
+ |
(TAT)n |
Simple_repeat |
scaffold9045 |
81052 |
81113 |
+ |
(ATTATA)n |
Simple_repeat |
scaffold9045 |
81704 |
81714 |
+ |
(CAGTT)n |
Simple_repeat |
scaffold9045 |
81715 |
81780 |
+ |
(TCAGTTCAGC)n |
Simple_repeat |
scaffold9045 |
81781 |
81864 |
+ |
(CAGTT)n |
Simple_repeat |
scaffold9045 |
81865 |
81919 |
+ |
(TTCAG)n |
Simple_repeat |
scaffold9045 |
81920 |
81942 |
+ |
(CAGTT)n |
Simple_repeat |
scaffold9045 |
82025 |
82068 |
+ |
(ATAGA)n |
Simple_repeat |
scaffold9045 |
82249 |
82285 |
+ |
(TATTTT)n |
Simple_repeat |
scaffold9045 |
82286 |
82320 |
+ |
(T)n |
Simple_repeat |
scaffold9045 |
82321 |
82365 |
+ |
(TATTTT)n |
Simple_repeat |
scaffold9045 |
89035 |
89060 |
+ |
(AG)n |
Simple_repeat |
scaffold9045 |
93225 |
93260 |
+ |
(GAA)n |
Simple_repeat |
scaffold9045 |
93884 |
94030 |
+ |
(ATTGG)n |
Simple_repeat |
scaffold9045 |
94120 |
94175 |
+ |
PL523 |
Unspecified |
scaffold9045 |
94323 |
94423 |
+ |
(TTCAA)n |
Simple_repeat |
scaffold9045 |
94670 |
94724 |
+ |
(TGGATT)n |
Simple_repeat |
scaffold9045 |
97205 |
97250 |
- |
RS18032 |
Unspecified |
scaffold9045 |
97219 |
97390 |
- |
RS5 |
Unspecified |
scaffold9045 |
97590 |
97678 |
+ |
(ATTTTT)n |
Simple_repeat |
scaffold9045 |
97770 |
97843 |
+ |
(T)n |
Simple_repeat |
scaffold9045 |
97844 |
97855 |
+ |
(ATTTTT)n |
Simple_repeat |
scaffold9045 |
98342 |
98363 |
+ |
(AT)n |
Simple_repeat |
scaffold9045 |
98411 |
98465 |
+ |
HAT-14_Mad |
DNA/hAT-Tip100 |
scaffold9045 |
98637 |
98998 |
+ |
PL3 |
Unspecified |
scaffold9045 |
99000 |
99245 |
+ |
RS17595 |
Unspecified |
scaffold9045 |
100165 |
100492 |
+ |
RS17768 |
Unspecified |
scaffold9045 |
100686 |
100739 |
+ |
(TCG)n |
Simple_repeat |
scaffold9045 |
100814 |
100881 |
+ |
A-rich |
Low_complexity |
scaffold9045 |
101104 |
101195 |
+ |
RS972 |
Unspecified |
scaffold9045 |
104233 |
104478 |
+ |
RS17595 |
Unspecified |
scaffold9045 |
104589 |
104606 |
+ |
(CAT)n |
Simple_repeat |
scaffold9045 |
105402 |
105729 |
+ |
RS17768 |
Unspecified |
scaffold9045 |
105926 |
105979 |
+ |
(TCG)n |
Simple_repeat |
scaffold9045 |
106044 |
106101 |
+ |
(TCA)n |
Simple_repeat |
scaffold9045 |
106291 |
106313 |
+ |
(T)n |
Simple_repeat |
scaffold9045 |
108392 |
108458 |
+ |
(TTACTCA)n |
Simple_repeat |
scaffold9045 |
110464 |
110811 |
+ |
RS846 |
Unspecified |
scaffold9045 |
110937 |
110985 |
+ |
(ATTAA)n |
Simple_repeat |
scaffold9045 |
113238 |
113483 |
+ |
RS17595 |
Unspecified |
scaffold9045 |
114404 |
114731 |
+ |
RS17768 |
Unspecified |
scaffold9045 |
114925 |
114978 |
+ |
(TCG)n |
Simple_repeat |
scaffold9045 |
115043 |
115100 |
+ |
(TCA)n |
Simple_repeat |
scaffold9045 |
115290 |
115312 |
+ |
(T)n |
Simple_repeat |
scaffold9045 |
117185 |
117270 |
+ |
RS511 |
Unspecified |
scaffold9045 |
117663 |
117743 |
+ |
(ACTTAA)n |
Simple_repeat |
scaffold9045 |
117927 |
118191 |
+ |
RS17600 |
Unspecified |
scaffold9045 |
118464 |
118496 |
+ |
A-rich |
Low_complexity |
scaffold9045 |
118719 |
118766 |
+ |
(ATTACTT)n |
Simple_repeat |
scaffold9045 |
120028 |
120736 |
+ |
RS846 |
Unspecified |
scaffold9045 |
120629 |
120751 |
- |
RS6740 |
Unspecified |
scaffold9045 |
120757 |
120785 |
+ |
(ATAA)n |
Simple_repeat |
scaffold9045 |
120786 |
120934 |
- |
RS11206 |
Unspecified |
scaffold9045 |
121004 |
121121 |
- |
RS3502 |
Unspecified |
scaffold9045 |
121438 |
121470 |
+ |
A-rich |
Low_complexity |
scaffold9045 |
121693 |
121740 |
+ |
(ATTACTT)n |
Simple_repeat |
scaffold9045 |
123002 |
123710 |
+ |
RS846 |
Unspecified |
scaffold9045 |
123603 |
123725 |
- |
RS6740 |
Unspecified |
scaffold9045 |
123731 |
123759 |
+ |
(ATAA)n |
Simple_repeat |
scaffold9045 |
123760 |
123908 |
- |
RS11206 |
Unspecified |
scaffold9045 |
123978 |
124158 |
- |
RS3502 |
Unspecified |
scaffold9045 |
124172 |
124283 |
+ |
RS12303 |
Unspecified |
scaffold9045 |
124190 |
124426 |
- |
RS4407 |
Unspecified |
scaffold9045 |
124563 |
124579 |
+ |
(A)n |
Simple_repeat |
scaffold9045 |
124742 |
124854 |
+ |
RS1071 |
Unspecified |
scaffold9045 |
124962 |
125023 |
+ |
A-rich |
Low_complexity |
scaffold9045 |
125726 |
126194 |
+ |
PL402 |
Unspecified |
scaffold9045 |
127287 |
128052 |
+ |
RS14500 |
Unspecified |
scaffold9045 |
128227 |
128278 |
+ |
PL601 |
Unspecified |
scaffold9045 |
128286 |
128608 |
+ |
RS846 |
Unspecified |
scaffold9045 |
128501 |
128623 |
- |
RS6740 |
Unspecified |
scaffold9045 |
128753 |
128825 |
+ |
(AATA)n |
Simple_repeat |
scaffold9045 |
129500 |
130265 |
+ |
RS14500 |
Unspecified |
scaffold9045 |
129905 |
130338 |
+ |
RS18289 |
Unspecified |
scaffold9045 |
130356 |
130513 |
+ |
RS16724 |
Unspecified |
scaffold9045 |
130875 |
131635 |
+ |
RS14500 |
Unspecified |
scaffold9045 |
131275 |
131708 |
+ |
RS18289 |
Unspecified |
scaffold9045 |
131726 |
131883 |
+ |
RS16724 |
Unspecified |
scaffold9045 |
134214 |
134543 |
+ |
(A)n |
Simple_repeat |
scaffold9045 |
136968 |
136989 |
+ |
(CAG)n |
Simple_repeat |
scaffold9045 |
139561 |
139591 |
+ |
(AGCAGC)n |
Simple_repeat |
scaffold9045 |
140497 |
140523 |
+ |
(AAAG)n |
Simple_repeat |
scaffold9045 |
141980 |
142008 |
+ |
(AAC)n |
Simple_repeat |
scaffold9045 |
146642 |
146668 |
+ |
A-rich |
Low_complexity |
scaffold9045 |
146782 |
146839 |
+ |
(CCA)n |
Simple_repeat |
scaffold9045 |
146915 |
146949 |
+ |
(T)n |
Simple_repeat |
scaffold9045 |
147913 |
147945 |
+ |
(TCATCT)n |
Simple_repeat |
scaffold9045 |
148000 |
148142 |
- |
RS222 |
Unspecified |
scaffold9045 |
148388 |
148546 |
+ |
RS997 |
Unspecified |
scaffold9045 |
148416 |
148546 |
+ |
RS415 |
Unspecified |
scaffold9045 |
148768 |
148810 |
+ |
(T)n |
Simple_repeat |
scaffold9045 |
148942 |
149064 |
- |
RS2016 |
Unspecified |
scaffold9045 |
150178 |
150203 |
+ |
(T)n |
Simple_repeat |
scaffold9045 |
151027 |
151149 |
+ |
(AATTATT)n |
Simple_repeat |
scaffold9045 |
151214 |
151323 |
+ |
RS11559 |
Unspecified |
scaffold9045 |
151451 |
151488 |
+ |
(AATTCT)n |
Simple_repeat |
scaffold9045 |
151491 |
151597 |
+ |
RS10524 |
Unspecified |
scaffold9045 |
151605 |
151746 |
- |
RS7727 |
Unspecified |
scaffold9045 |
151736 |
151807 |
+ |
RS10524 |
Unspecified |