scaffold917 Repeat List
genome |
start |
end |
strand |
repeat-name |
repeat-class |
scaffold917 |
1 |
1677 |
- |
GYPOT1_I-int |
LTR/Gypsy |
scaffold917 |
231 |
1677 |
- |
GYPOT1_I-int |
LTR/Gypsy |
scaffold917 |
2627 |
2751 |
+ |
Gypsy59-ZM_I-int |
LTR/Gypsy |
scaffold917 |
3061 |
3123 |
+ |
(T)n |
Simple_repeat |
scaffold917 |
3241 |
3704 |
- |
RS647 |
Unspecified |
scaffold917 |
3920 |
4256 |
+ |
ENSPM-6_ZM |
DNA/CMC-EnSpm |
scaffold917 |
4366 |
4400 |
+ |
(ATATT)n |
Simple_repeat |
scaffold917 |
4750 |
4798 |
+ |
GA-rich |
Low_complexity |
scaffold917 |
4814 |
4871 |
- |
RS2827 |
Unspecified |
scaffold917 |
4919 |
4956 |
+ |
(ATTGTTT)n |
Simple_repeat |
scaffold917 |
4964 |
5186 |
- |
PL699 |
Unspecified |
scaffold917 |
5859 |
6038 |
+ |
RS63 |
Unspecified |
scaffold917 |
6158 |
6181 |
+ |
(A)n |
Simple_repeat |
scaffold917 |
9575 |
9784 |
+ |
PL700 |
Unspecified |
scaffold917 |
9980 |
10005 |
+ |
(TGT)n |
Simple_repeat |
scaffold917 |
10282 |
10436 |
- |
RS38 |
Unspecified |
scaffold917 |
10583 |
10616 |
+ |
(TATA)n |
Simple_repeat |
scaffold917 |
11424 |
11803 |
+ |
RS160 |
Unspecified |
scaffold917 |
12030 |
12064 |
+ |
(TTTTCT)n |
Simple_repeat |
scaffold917 |
12219 |
12265 |
+ |
A-rich |
Low_complexity |
scaffold917 |
12380 |
12458 |
+ |
PL393 |
Unspecified |
scaffold917 |
12682 |
12787 |
+ |
RS9484 |
Unspecified |
scaffold917 |
13037 |
13409 |
- |
RS160 |
Unspecified |
scaffold917 |
14603 |
15181 |
- |
PL509 |
Unspecified |
scaffold917 |
15197 |
15272 |
+ |
(AACTG)n |
Simple_repeat |
scaffold917 |
15332 |
15403 |
+ |
(ATT)n |
Simple_repeat |
scaffold917 |
15408 |
15441 |
+ |
(T)n |
Simple_repeat |
scaffold917 |
16029 |
16135 |
+ |
(TAT)n |
Simple_repeat |
scaffold917 |
16172 |
16210 |
+ |
(ACA)n |
Simple_repeat |
scaffold917 |
16591 |
16743 |
+ |
RS1746 |
Unspecified |
scaffold917 |
16642 |
16755 |
- |
RS1746 |
Unspecified |
scaffold917 |
16937 |
17076 |
+ |
(ATA)n |
Simple_repeat |
scaffold917 |
17078 |
17167 |
+ |
(TTA)n |
Simple_repeat |
scaffold917 |
17168 |
17236 |
+ |
(TAA)n |
Simple_repeat |
scaffold917 |
17237 |
17348 |
+ |
(TTA)n |
Simple_repeat |
scaffold917 |
17363 |
17424 |
+ |
EnSpm-34_SBi |
DNA/CMC-EnSpm |
scaffold917 |
17425 |
17495 |
+ |
(TAA)n |
Simple_repeat |
scaffold917 |
17496 |
17556 |
+ |
(ACA)n |
Simple_repeat |
scaffold917 |
17557 |
17603 |
+ |
EnSpm-34_SBi |
DNA/CMC-EnSpm |
scaffold917 |
17604 |
17630 |
+ |
(TAA)n |
Simple_repeat |
scaffold917 |
17631 |
17687 |
+ |
(TTTCTGAAGT)n |
Simple_repeat |
scaffold917 |
17942 |
17964 |
+ |
(T)n |
Simple_repeat |
scaffold917 |
18366 |
18562 |
- |
RS757 |
Unspecified |
scaffold917 |
19539 |
19601 |
+ |
Copia-142_SB-I |
LTR/Copia |
scaffold917 |
20176 |
20308 |
- |
RS1669 |
Unspecified |
scaffold917 |
21799 |
22471 |
- |
L1-1_EPa |
LINE/L1 |
scaffold917 |
23239 |
23340 |
+ |
(AACTG)n |
Simple_repeat |
scaffold917 |
23341 |
23358 |
+ |
A-rich |
Low_complexity |
scaffold917 |
23361 |
23414 |
+ |
(TAA)n |
Simple_repeat |
scaffold917 |
23429 |
23470 |
+ |
(T)n |
Simple_repeat |
scaffold917 |
23478 |
23550 |
+ |
(ATA)n |
Simple_repeat |
scaffold917 |
23698 |
23854 |
+ |
(AATATT)n |
Simple_repeat |
scaffold917 |
23859 |
24048 |
+ |
(AACTG)n |
Simple_repeat |
scaffold917 |
24577 |
24604 |
+ |
(A)n |
Simple_repeat |
scaffold917 |
25425 |
25564 |
- |
RS637 |
Unspecified |
scaffold917 |
25562 |
25987 |
- |
RS637 |
Unspecified |
scaffold917 |
26008 |
26074 |
+ |
(ATAA)n |
Simple_repeat |
scaffold917 |
26588 |
26604 |
+ |
(T)n |
Simple_repeat |
scaffold917 |
27187 |
27213 |
+ |
(T)n |
Simple_repeat |
scaffold917 |
27390 |
27447 |
+ |
(T)n |
Simple_repeat |
scaffold917 |
27618 |
27633 |
+ |
(ATTTTAA)n |
Simple_repeat |
scaffold917 |
27634 |
27650 |
+ |
(T)n |
Simple_repeat |
scaffold917 |
27651 |
27660 |
+ |
(ATTTTAA)n |
Simple_repeat |
scaffold917 |
27878 |
27923 |
+ |
GA-rich |
Low_complexity |
scaffold917 |
28479 |
28719 |
- |
PL580 |
Unspecified |
scaffold917 |
28974 |
29002 |
+ |
A-rich |
Low_complexity |
scaffold917 |
29230 |
29490 |
+ |
RS365 |
Unspecified |
scaffold917 |
29638 |
29671 |
+ |
(ATCTAT)n |
Simple_repeat |
scaffold917 |
30029 |
30078 |
+ |
(AATATA)n |
Simple_repeat |
scaffold917 |
30270 |
30301 |
+ |
(A)n |
Simple_repeat |
scaffold917 |
30971 |
30997 |
+ |
G-rich |
Low_complexity |
scaffold917 |
31059 |
31088 |
+ |
(ATCATT)n |
Simple_repeat |
scaffold917 |
31372 |
31598 |
- |
PL607 |
Unspecified |
scaffold917 |
31597 |
31620 |
+ |
(ATCT)n |
Simple_repeat |
scaffold917 |
31625 |
31990 |
- |
RS600 |
Unspecified |
scaffold917 |
31859 |
32013 |
- |
RS55 |
Unspecified |
scaffold917 |
32220 |
32322 |
- |
RS7647 |
Unspecified |
scaffold917 |
32437 |
32869 |
- |
PL582 |
Unspecified |
scaffold917 |
32950 |
33006 |
+ |
(CTCTTTT)n |
Simple_repeat |
scaffold917 |
33038 |
33170 |
+ |
RS4014 |
Unspecified |
scaffold917 |
33069 |
33533 |
+ |
RS1401 |
Unspecified |
scaffold917 |
34599 |
34961 |
+ |
(TCAT)n |
Simple_repeat |
scaffold917 |
34599 |
34648 |
+ |
(TCAT)n |
Simple_repeat |
scaffold917 |
34626 |
34961 |
- |
RS12368 |
Unspecified |
scaffold917 |
35680 |
35753 |
+ |
A-rich |
Low_complexity |
scaffold917 |
35982 |
36052 |
+ |
(GGT)n |
Simple_repeat |
scaffold917 |
36206 |
36249 |
+ |
GA-rich |
Low_complexity |
scaffold917 |
36767 |
36861 |
+ |
RS16382 |
Unspecified |
scaffold917 |
36897 |
36930 |
+ |
(T)n |
Simple_repeat |
scaffold917 |
37087 |
37194 |
- |
RS4475 |
Unspecified |
scaffold917 |
37087 |
37180 |
+ |
RS16382 |
Unspecified |
scaffold917 |
37295 |
37318 |
+ |
(GTC)n |
Simple_repeat |
scaffold917 |
37469 |
37498 |
+ |
A-rich |
Low_complexity |
scaffold917 |
39237 |
39357 |
- |
Copia-3_PTri-I |
LTR/Copia |
scaffold917 |
39526 |
39758 |
- |
RS512 |
Unspecified |
scaffold917 |
39743 |
40270 |
- |
PL511 |
Unspecified |
scaffold917 |
39743 |
40155 |
- |
PL96 |
Unspecified |
scaffold917 |
40269 |
40432 |
- |
RS512 |
Unspecified |
scaffold917 |
40654 |
40877 |
+ |
RS18 |
Unspecified |
scaffold917 |
41125 |
41506 |
+ |
RS1010 |
Unspecified |
scaffold917 |
42147 |
42215 |
+ |
(TTTA)n |
Simple_repeat |
scaffold917 |
42468 |
42513 |
+ |
(TTTAT)n |
Simple_repeat |
scaffold917 |
42540 |
42569 |
+ |
(TTTTA)n |
Simple_repeat |
scaffold917 |
42701 |
42944 |
+ |
RS2543 |
Unspecified |
scaffold917 |
43103 |
43136 |
+ |
(T)n |
Simple_repeat |
scaffold917 |
43244 |
43366 |
+ |
(AATTAA)n |
Simple_repeat |
scaffold917 |
43932 |
43988 |
+ |
(TTA)n |
Simple_repeat |
scaffold917 |
44591 |
44619 |
+ |
(GTTTGA)n |
Simple_repeat |
scaffold917 |
44779 |
45464 |
- |
PL103 |
Unspecified |
scaffold917 |
47011 |
47154 |
- |
RS613 |
Unspecified |
scaffold917 |
47066 |
47165 |
+ |
RS14955 |
Unspecified |
scaffold917 |
47330 |
47569 |
+ |
RS4 |
Unspecified |
scaffold917 |
47347 |
47604 |
+ |
RS18405 |
Unspecified |
scaffold917 |
47799 |
47829 |
+ |
(T)n |
Simple_repeat |
scaffold917 |
48105 |
48133 |
+ |
(T)n |
Simple_repeat |
scaffold917 |
48205 |
48221 |
+ |
(A)n |
Simple_repeat |
scaffold917 |
48236 |
48485 |
+ |
(AATAC)n |
Simple_repeat |
scaffold917 |
48448 |
48485 |
+ |
(AATAC)n |
Simple_repeat |
scaffold917 |
48486 |
48613 |
- |
ATCopia28_I-int |
LTR/Copia |
scaffold917 |
100250 |
100292 |
+ |
A-rich |
Low_complexity |