genome | start | end | strand | repeat-name | repeat-class |
---|---|---|---|---|---|
scaffold9265 | 1 | 97 | + | PL905 | Unspecified |
scaffold9265 | 96 | 1093 | + | RS205 | Unspecified |
scaffold9265 | 1015 | 2305 | - | PL124 | Unspecified |
scaffold9265 | 2302 | 2521 | + | PL570 | Unspecified |
scaffold9265 | 2894 | 2983 | + | (CCTCTC)n | Simple_repeat |
scaffold9265 | 3415 | 3885 | + | PL90 | Unspecified |
scaffold9265 | 5177 | 5206 | + | (TC)n | Simple_repeat |
scaffold9265 | 6148 | 6200 | + | GA-rich | Low_complexity |
scaffold9265 | 7671 | 7731 | + | (TTATG)n | Simple_repeat |
scaffold9265 | 8182 | 8304 | - | Gypsy16-VV_I-int | LTR/Gypsy |
scaffold9265 | 8442 | 9251 | - | Gypsy16-VV_I-int | LTR/Gypsy |
scaffold9265 | 9804 | 11612 | - | gypsy | gypsy(TransposonPSI) |
scaffold9265 | 9834 | 11187 | - | Gypsy-38_Mad-I | LTR/Gypsy |
scaffold9265 | 13539 | 13574 | + | (TTTAGGA)n | Simple_repeat |
scaffold9265 | 13580 | 14194 | - | PL305 | Unspecified |
scaffold9265 | 14423 | 14447 | + | (ATA)n | Simple_repeat |
scaffold9265 | 14453 | 14711 | - | RS1 | Unspecified |
scaffold9265 | 15236 | 15268 | + | (T)n | Simple_repeat |
scaffold9265 | 15480 | 15669 | - | RS1669 | Unspecified |
scaffold9265 | 15721 | 15919 | + | RS26 | Unspecified |
scaffold9265 | 16495 | 16605 | + | (ATT)n | Simple_repeat |
scaffold9265 | 16676 | 16772 | + | (TAT)n | Simple_repeat |
scaffold9265 | 16824 | 16914 | - | RS6422 | Unspecified |
scaffold9265 | 17757 | 19155 | - | RS6422 | Unspecified |
scaffold9265 | 19153 | 19202 | + | (TGTATT)n | Simple_repeat |
scaffold9265 | 19223 | 19725 | + | Copia-4_GM-I | LTR/Copia |
scaffold9265 | 19855 | 20301 | + | Copia-4_GM-I | LTR/Copia |
scaffold9265 | 20357 | 21021 | + | Copia-4_GM-I | LTR/Copia |
scaffold9265 | 21021 | 21444 | + | Copia-4_GM-I | LTR/Copia |
scaffold9265 | 21566 | 23772 | + | Copia-4_GM-I | LTR/Copia |
scaffold9265 | 23775 | 24389 | + | RS5300 | Unspecified |
scaffold9265 | 24556 | 24568 | + | (TTATA)n | Simple_repeat |
scaffold9265 | 24569 | 24614 | + | (AATATT)n | Simple_repeat |
scaffold9265 | 24615 | 24629 | + | (TTATA)n | Simple_repeat |
scaffold9265 | 24727 | 24808 | + | (ATTAAT)n | Simple_repeat |
scaffold9265 | 25220 | 25250 | - | RS43 | Unspecified |
scaffold9265 | 25251 | 25424 | + | RS179 | Unspecified |
scaffold9265 | 25423 | 25579 | - | RS43 | Unspecified |
scaffold9265 | 25937 | 26206 | - | RS1611 | Unspecified |
scaffold9265 | 26210 | 27762 | - | Copia-79_Mad-I | LTR/Copia |
scaffold9265 | 28100 | 28177 | + | (GAAGCA)n | Simple_repeat |
scaffold9265 | 28315 | 29087 | - | Copia-79_Mad-I | LTR/Copia |
scaffold9265 | 29565 | 29599 | - | Copia-79_Mad-I | LTR/Copia |
scaffold9265 | 29939 | 30793 | - | TY1_Copia | TY1_Copia(TransposonPSI) |
scaffold9265 | 31356 | 31625 | - | RS1611 | Unspecified |
scaffold9265 | 31716 | 31762 | + | (T)n | Simple_repeat |
scaffold9265 | 32287 | 32636 | + | RS4209 | Unspecified |
scaffold9265 | 32911 | 32947 | + | (TATAA)n | Simple_repeat |
scaffold9265 | 33043 | 33069 | + | (A)n | Simple_repeat |
scaffold9265 | 33155 | 33228 | - | RS7290 | Unspecified |
scaffold9265 | 33989 | 34875 | + | PL802 | Unspecified |
scaffold9265 | 34191 | 34951 | + | RS3462 | Unspecified |
scaffold9265 | 35888 | 36144 | + | (TTCAG)n | Simple_repeat |
scaffold9265 | 36325 | 36361 | + | (T)n | Simple_repeat |
scaffold9265 | 36418 | 36444 | + | (T)n | Simple_repeat |
scaffold9265 | 36497 | 36530 | + | (TCGTGT)n | Simple_repeat |
scaffold9265 | 37045 | 37078 | + | (GTGTC)n | Simple_repeat |
scaffold9265 | 38569 | 38621 | + | (TGC)n | Simple_repeat |
scaffold9265 | 38600 | 38639 | + | (GCTGGT)n | Simple_repeat |
scaffold9265 | 38696 | 39883 | + | RS420 | Unspecified |
scaffold9265 | 38959 | 38976 | + | (TGC)n | Simple_repeat |
scaffold9265 | 39046 | 39075 | + | (ACC)n | Simple_repeat |
scaffold9265 | 40977 | 40999 | + | (A)n | Simple_repeat |
scaffold9265 | 41489 | 41555 | + | A-rich | Low_complexity |
scaffold9265 | 41925 | 42407 | + | PL307 | Unspecified |
scaffold9265 | 42554 | 42623 | + | GA-rich | Low_complexity |
scaffold9265 | 42761 | 42790 | + | (CCTTT)n | Simple_repeat |
scaffold9265 | 43306 | 43986 | + | LINE | LINE(TransposonPSI) |
scaffold9265 | 43355 | 43712 | + | SHALINE10_MT | LINE/L1 |
scaffold9265 | 45831 | 45860 | + | (A)n | Simple_repeat |
scaffold9265 | 45910 | 45974 | + | (A)n | Simple_repeat |
scaffold9265 | 46629 | 46764 | - | PL368 | Unspecified |
scaffold9265 | 46663 | 46778 | + | RS8400 | Unspecified |
scaffold9265 | 47141 | 47170 | + | (TTGTG)n | Simple_repeat |
scaffold9265 | 47835 | 47866 | + | (TCGCT)n | Simple_repeat |
scaffold9265 | 51908 | 51949 | + | PL323 | Unspecified |
scaffold9265 | 51913 | 52070 | - | RS314 | Unspecified |
scaffold9265 | 52144 | 52444 | - | Copia-12_SB-I | LTR/Copia |
scaffold9265 | 52144 | 52452 | - | ATGP5A_I-int | LTR/Gypsy |
scaffold9265 | 52349 | 52444 | - | Copia-12_SB-I | LTR/Copia |
scaffold9265 | 52375 | 52452 | - | ATGP5A_I-int | LTR/Gypsy |
scaffold9265 | 52624 | 53517 | - | ltr_Roo | ltr_Roo(TransposonPSI) |
scaffold9265 | 52826 | 53030 | - | Gypsy-3_Pru-I | LTR/Gypsy |
scaffold9265 | 53084 | 53481 | - | Gypsy-3_Pru-I | LTR/Gypsy |
scaffold9265 | 54188 | 55525 | - | Gypsy-3_Pru-I | LTR/Gypsy |
scaffold9265 | 56706 | 56749 | + | (TGCTGT)n | Simple_repeat |
scaffold9265 | 58086 | 58115 | + | (TTGTG)n | Simple_repeat |
scaffold9265 | 58414 | 58458 | + | (TTACAA)n | Simple_repeat |
scaffold9265 | 58687 | 58727 | + | (AT)n | Simple_repeat |
scaffold9265 | 59355 | 59535 | + | RS3085 | Unspecified |
scaffold9265 | 59714 | 59762 | + | (TTATCAA)n | Simple_repeat |
scaffold9265 | 59923 | 59968 | + | (TCTACTC)n | Simple_repeat |
scaffold9265 | 59966 | 59990 | + | (TACA)n | Simple_repeat |
scaffold9265 | 60149 | 60516 | + | RS2841 | Unspecified |
scaffold9265 | 60302 | 60768 | + | (A)n | Simple_repeat |
scaffold9265 | 60670 | 60768 | + | (A)n | Simple_repeat |
scaffold9265 | 62228 | 62446 | + | PL683 | Unspecified |
scaffold9265 | 62446 | 62496 | + | A-rich | Low_complexity |
scaffold9265 | 62669 | 62815 | - | helitronORF | helitronORF(TransposonPSI) |
scaffold9265 | 62681 | 62746 | - | Helitron-5_ZM | RC/Helitron |
scaffold9265 | 63829 | 63854 | + | (A)n | Simple_repeat |
scaffold9265 | 63968 | 63989 | + | (A)n | Simple_repeat |
scaffold9265 | 64428 | 64443 | + | (AATTTTC)n | Simple_repeat |
scaffold9265 | 64444 | 64494 | + | (TATAAT)n | Simple_repeat |
scaffold9265 | 64495 | 64519 | + | (AATTTTC)n | Simple_repeat |
scaffold9265 | 64731 | 64772 | + | A-rich | Low_complexity |
scaffold9265 | 64756 | 64776 | + | (A)n | Simple_repeat |
scaffold9265 | 64948 | 65047 | - | RS9214 | Unspecified |
scaffold9265 | 65045 | 65456 | - | RS2174 | Unspecified |
scaffold9265 | 65524 | 65785 | - | RS365 | Unspecified |
scaffold9265 | 66508 | 66558 | + | Copia10-VV_LTR | LTR/Copia |
scaffold9265 | 66685 | 67200 | + | TY1_Copia | TY1_Copia(TransposonPSI) |
scaffold9265 | 66941 | 67133 | + | TORTL1 | LTR/Copia |
scaffold9265 | 67318 | 67368 | + | Copia10-VV_LTR | LTR/Copia |
scaffold9265 | 67590 | 67616 | + | (TTA)n | Simple_repeat |
scaffold9265 | 69772 | 69806 | + | (CGTGTCT)n | Simple_repeat |
scaffold9265 | 71117 | 71150 | + | A-rich | Low_complexity |
scaffold9265 | 71853 | 72062 | - | RS524 | Unspecified |
scaffold9265 | 72107 | 72183 | - | ATGP11_LTR | LTR/Gypsy |