scaffold9482 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold9482 |
1 |
87 |
+ |
(ATA)n |
Simple_repeat |
| scaffold9482 |
96 |
184 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold9482 |
242 |
527 |
+ |
RS160 |
Unspecified |
| scaffold9482 |
531 |
897 |
- |
RS8 |
Unspecified |
| scaffold9482 |
897 |
981 |
+ |
RS160 |
Unspecified |
| scaffold9482 |
1905 |
1924 |
+ |
(T)n |
Simple_repeat |
| scaffold9482 |
2252 |
2867 |
- |
RS6422 |
Unspecified |
| scaffold9482 |
3610 |
3995 |
- |
RS8 |
Unspecified |
| scaffold9482 |
3994 |
4060 |
- |
RS16679 |
Unspecified |
| scaffold9482 |
4117 |
4498 |
+ |
RS512 |
Unspecified |
| scaffold9482 |
5031 |
5191 |
- |
RS38 |
Unspecified |
| scaffold9482 |
5315 |
5344 |
+ |
G-rich |
Low_complexity |
| scaffold9482 |
5523 |
5568 |
+ |
(CCTTC)n |
Simple_repeat |
| scaffold9482 |
5727 |
5815 |
- |
RS18078 |
Unspecified |
| scaffold9482 |
6195 |
6240 |
+ |
(TTTTTAT)n |
Simple_repeat |
| scaffold9482 |
6274 |
6360 |
+ |
(ACC)n |
Simple_repeat |
| scaffold9482 |
6369 |
6394 |
+ |
(TAA)n |
Simple_repeat |
| scaffold9482 |
6395 |
6412 |
+ |
(A)n |
Simple_repeat |
| scaffold9482 |
6635 |
6668 |
+ |
A-rich |
Low_complexity |
| scaffold9482 |
6846 |
6885 |
+ |
(GGAT)n |
Simple_repeat |
| scaffold9482 |
6892 |
6948 |
+ |
(CATC)n |
Simple_repeat |
| scaffold9482 |
7018 |
7083 |
- |
RS1921 |
Unspecified |
| scaffold9482 |
7427 |
7451 |
+ |
(A)n |
Simple_repeat |
| scaffold9482 |
7530 |
7583 |
+ |
(AAACAA)n |
Simple_repeat |
| scaffold9482 |
8367 |
8480 |
- |
RS4475 |
Unspecified |
| scaffold9482 |
8566 |
8659 |
+ |
RS4475 |
Unspecified |
| scaffold9482 |
8666 |
8925 |
- |
RS7374 |
Unspecified |
| scaffold9482 |
9203 |
9504 |
- |
RS4841 |
Unspecified |
| scaffold9482 |
9965 |
9995 |
+ |
(ATAATG)n |
Simple_repeat |
| scaffold9482 |
10643 |
10705 |
+ |
(CCG)n |
Simple_repeat |
| scaffold9482 |
10857 |
10927 |
- |
RS4028 |
Unspecified |
| scaffold9482 |
11070 |
11129 |
+ |
RS247 |
Unspecified |
| scaffold9482 |
11097 |
11113 |
+ |
(ATTGGTT)n |
Simple_repeat |
| scaffold9482 |
11114 |
11150 |
+ |
(TTG)n |
Simple_repeat |
| scaffold9482 |
11486 |
11610 |
- |
RS6187 |
Unspecified |
| scaffold9482 |
12575 |
12596 |
+ |
(A)n |
Simple_repeat |
| scaffold9482 |
13281 |
13329 |
+ |
GA-rich |
Low_complexity |
| scaffold9482 |
13869 |
14096 |
- |
RS3203 |
Unspecified |
| scaffold9482 |
14275 |
14341 |
+ |
(CAATT)n |
Simple_repeat |
| scaffold9482 |
14625 |
14680 |
+ |
(GTATCAA)n |
Simple_repeat |
| scaffold9482 |
15608 |
15684 |
+ |
PL169 |
Unspecified |
| scaffold9482 |
16221 |
16267 |
+ |
(ATTAA)n |
Simple_repeat |
| scaffold9482 |
16436 |
16529 |
- |
RS4475 |
Unspecified |
| scaffold9482 |
17152 |
17181 |
+ |
(CTC)n |
Simple_repeat |
| scaffold9482 |
18056 |
18076 |
+ |
(GAA)n |
Simple_repeat |
| scaffold9482 |
19666 |
19702 |
+ |
(ATATT)n |
Simple_repeat |
| scaffold9482 |
19988 |
20021 |
+ |
(ACGAAT)n |
Simple_repeat |
| scaffold9482 |
20421 |
20444 |
+ |
(CATA)n |
Simple_repeat |
| scaffold9482 |
22570 |
22643 |
- |
RS10543 |
Unspecified |
| scaffold9482 |
22669 |
22689 |
+ |
(A)n |
Simple_repeat |
| scaffold9482 |
23037 |
23077 |
+ |
(ATTAA)n |
Simple_repeat |
| scaffold9482 |
23196 |
23307 |
+ |
PL370 |
Unspecified |
| scaffold9482 |
23209 |
23409 |
+ |
PL438 |
Unspecified |
| scaffold9482 |
23411 |
23603 |
+ |
RS2468 |
Unspecified |
| scaffold9482 |
23516 |
23630 |
+ |
RS9939 |
Unspecified |
| scaffold9482 |
23598 |
23929 |
+ |
PL380 |
Unspecified |
| scaffold9482 |
23933 |
24391 |
+ |
RS849 |
Unspecified |
| scaffold9482 |
24064 |
24536 |
- |
RS3469 |
Unspecified |
| scaffold9482 |
24692 |
24726 |
+ |
GA-rich |
Low_complexity |
| scaffold9482 |
24752 |
24791 |
+ |
(GCC)n |
Simple_repeat |
| scaffold9482 |
24797 |
24912 |
+ |
A-rich |
Low_complexity |
| scaffold9482 |
24937 |
24982 |
+ |
(AATT)n |
Simple_repeat |
| scaffold9482 |
26343 |
26375 |
+ |
A-rich |
Low_complexity |
| scaffold9482 |
27818 |
27851 |
+ |
(TTGATG)n |
Simple_repeat |
| scaffold9482 |
29078 |
29100 |
+ |
(A)n |
Simple_repeat |
| scaffold9482 |
29320 |
29433 |
+ |
RS14583 |
Unspecified |
| scaffold9482 |
30394 |
30493 |
+ |
RS10273 |
Unspecified |
| scaffold9482 |
31886 |
31915 |
+ |
(ACA)n |
Simple_repeat |
| scaffold9482 |
33723 |
33817 |
+ |
RS170 |
Unspecified |
| scaffold9482 |
35159 |
35189 |
+ |
(AAAAAT)n |
Simple_repeat |
| scaffold9482 |
36328 |
36384 |
+ |
(TAA)n |
Simple_repeat |
| scaffold9482 |
36401 |
36426 |
+ |
(A)n |
Simple_repeat |
| scaffold9482 |
36869 |
36920 |
+ |
GA-rich |
Low_complexity |
| scaffold9482 |
36934 |
36998 |
+ |
(AATTAA)n |
Simple_repeat |
| scaffold9482 |
37506 |
37543 |
+ |
(AATTTC)n |
Simple_repeat |
| scaffold9482 |
38755 |
38794 |
- |
HAT-N10_Mad |
DNA/hAT-Ac |
| scaffold9482 |
38766 |
38893 |
- |
HAT-N11_Mad |
DNA/hAT-Ac |
| scaffold9482 |
39332 |
39372 |
- |
HAT-N11_Mad |
DNA/hAT-Ac |
| scaffold9482 |
39477 |
39505 |
+ |
(A)n |
Simple_repeat |
| scaffold9482 |
42877 |
42950 |
+ |
(CAT)n |
Simple_repeat |
| scaffold9482 |
43178 |
43216 |
+ |
(TTATTGT)n |
Simple_repeat |
| scaffold9482 |
43591 |
43621 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold9482 |
45348 |
45377 |
+ |
(GGCCG)n |
Simple_repeat |
| scaffold9482 |
46182 |
46283 |
- |
RS16382 |
Unspecified |
| scaffold9482 |
46343 |
46369 |
+ |
(A)n |
Simple_repeat |
| scaffold9482 |
46692 |
46723 |
+ |
(GAGCT)n |
Simple_repeat |
| scaffold9482 |
47451 |
47488 |
+ |
(GGCGGT)n |
Simple_repeat |
| scaffold9482 |
47914 |
48045 |
+ |
RS178 |
Unspecified |
| scaffold9482 |
52010 |
52040 |
+ |
(ATT)n |
Simple_repeat |
| scaffold9482 |
56297 |
56551 |
- |
RS586 |
Unspecified |
| scaffold9482 |
57653 |
57677 |
+ |
(T)n |
Simple_repeat |
| scaffold9482 |
58386 |
58411 |
+ |
(T)n |
Simple_repeat |
| scaffold9482 |
58412 |
58434 |
+ |
(A)n |
Simple_repeat |
| scaffold9482 |
58605 |
58658 |
+ |
HAT-14_Mad |
DNA/hAT-Tip100 |
| scaffold9482 |
58861 |
59113 |
- |
RS145 |
Unspecified |
| scaffold9482 |
60204 |
60421 |
- |
RS356 |
Unspecified |
| scaffold9482 |
60204 |
60511 |
+ |
RS586 |
Unspecified |
| scaffold9482 |
60652 |
60762 |
+ |
RS17262 |
Unspecified |
| scaffold9482 |
60669 |
60762 |
+ |
RS16382 |
Unspecified |
| scaffold9482 |
62640 |
62665 |
+ |
(T)n |
Simple_repeat |
| scaffold9482 |
62789 |
62842 |
+ |
RS2386 |
Unspecified |
| scaffold9482 |
62962 |
62999 |
+ |
A-rich |
Low_complexity |
| scaffold9482 |
63676 |
63720 |
+ |
(CATCAA)n |
Simple_repeat |
| scaffold9482 |
65303 |
65322 |
+ |
(TAT)n |
Simple_repeat |
| scaffold9482 |
65571 |
65620 |
+ |
A-rich |
Low_complexity |
| scaffold9482 |
65604 |
65643 |
+ |
(TA)n |
Simple_repeat |
| scaffold9482 |
66321 |
66394 |
- |
RS506 |
Unspecified |
| scaffold9482 |
66589 |
66995 |
+ |
RS768 |
Unspecified |
| scaffold9482 |
67002 |
67435 |
+ |
RS7089 |
Unspecified |
| scaffold9482 |
67475 |
67853 |
- |
RS5659 |
Unspecified |
| scaffold9482 |
68520 |
68564 |
+ |
(TA)n |
Simple_repeat |
| scaffold9482 |
68562 |
68604 |
+ |
(ATAATCA)n |
Simple_repeat |
| scaffold9482 |
69232 |
69335 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold9482 |
69570 |
69881 |
+ |
PL54 |
Unspecified |
| scaffold9482 |
70739 |
70819 |
+ |
(ATT)n |
Simple_repeat |
| scaffold9482 |
70918 |
70952 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold9482 |
71140 |
71179 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold9482 |
71364 |
71567 |
+ |
RS4 |
Unspecified |
| scaffold9482 |
71895 |
71926 |
+ |
(AATCAT)n |
Simple_repeat |
| scaffold9482 |
72299 |
72355 |
+ |
(GCTTTTT)n |
Simple_repeat |
| scaffold9482 |
72455 |
72678 |
+ |
RS1349 |
Unspecified |
| scaffold9482 |
73028 |
73221 |
- |
Copia-3_PTri-I |
LTR/Copia |
| scaffold9482 |
73222 |
73294 |
- |
Copia-3_PTri-I |
LTR/Copia |
| scaffold9482 |
73602 |
74017 |
- |
RS1675 |
Unspecified |
| scaffold9482 |
74139 |
74239 |
- |
RS4569 |
Unspecified |
| scaffold9482 |
74314 |
74362 |
- |
RS4569 |
Unspecified |
| scaffold9482 |
74814 |
74874 |
- |
RS3831 |
Unspecified |
| scaffold9482 |
74849 |
74960 |
- |
RS3831 |
Unspecified |
| scaffold9482 |
74955 |
75254 |
- |
RS1619 |
Unspecified |
| scaffold9482 |
75449 |
75491 |
- |
RS979 |
Unspecified |
| scaffold9482 |
75550 |
75888 |
- |
RS979 |
Unspecified |
| scaffold9482 |
75663 |
76052 |
+ |
PL447 |
Unspecified |
| scaffold9482 |
77453 |
77493 |
+ |
(TTA)n |
Simple_repeat |
| scaffold9482 |
78160 |
78194 |
- |
PL571 |
Unspecified |
| scaffold9482 |
78166 |
78542 |
+ |
PL330 |
Unspecified |
| scaffold9482 |
78580 |
78714 |
+ |
PL330 |
Unspecified |
| scaffold9482 |
78598 |
78715 |
- |
RS4859 |
Unspecified |
| scaffold9482 |
78905 |
78951 |
- |
RS79 |
Unspecified |
| scaffold9482 |
79344 |
79485 |
+ |
(TTG)n |
Simple_repeat |
| scaffold9482 |
79486 |
79529 |
+ |
(TAT)n |
Simple_repeat |
| scaffold9482 |
79577 |
79734 |
+ |
PL90 |
Unspecified |
| scaffold9482 |
79733 |
79912 |
+ |
RS1542 |
Unspecified |
| scaffold9482 |
80411 |
80452 |
+ |
(A)n |
Simple_repeat |
| scaffold9482 |
80951 |
80986 |
+ |
(TCGTT)n |
Simple_repeat |
| scaffold9482 |
81469 |
81530 |
+ |
(TCAAT)n |
Simple_repeat |
| scaffold9482 |
82410 |
82442 |
+ |
(AAAATTA)n |
Simple_repeat |
| scaffold9482 |
82689 |
82737 |
- |
RS209 |
Unspecified |
| scaffold9482 |
82737 |
82817 |
- |
RS209 |
Unspecified |
| scaffold9482 |
83085 |
83165 |
+ |
(ATT)n |
Simple_repeat |
| scaffold9482 |
83263 |
83305 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold9482 |
83476 |
83515 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold9482 |
83702 |
83944 |
+ |
RS4 |
Unspecified |
| scaffold9482 |
84266 |
84297 |
+ |
(AATCAT)n |
Simple_repeat |
| scaffold9482 |
84485 |
84537 |
+ |
(GCTTTTT)n |
Simple_repeat |
| scaffold9482 |
85586 |
85954 |
- |
RS8 |
Unspecified |
| scaffold9482 |
86513 |
86541 |
+ |
(A)n |
Simple_repeat |
| scaffold9482 |
86513 |
86741 |
+ |
(A)n |
Simple_repeat |
| scaffold9482 |
86528 |
86741 |
+ |
RS9920 |
Unspecified |
| scaffold9482 |
86763 |
86916 |
+ |
RS11429 |
Unspecified |
| scaffold9482 |
86981 |
87220 |
- |
RS10 |
Unspecified |
| scaffold9482 |
87253 |
87687 |
- |
PL569 |
Unspecified |
| scaffold9482 |
87668 |
87708 |
+ |
RS48 |
Unspecified |
| scaffold9482 |
89640 |
89832 |
+ |
PL390 |
Unspecified |
| scaffold9482 |
89894 |
89970 |
+ |
A-rich |
Low_complexity |
| scaffold9482 |
90018 |
90054 |
+ |
(AAT)n |
Simple_repeat |
| scaffold9482 |
90018 |
90296 |
+ |
(AAT)n |
Simple_repeat |
| scaffold9482 |
90037 |
90296 |
+ |
RS12603 |
Unspecified |
| scaffold9482 |
90315 |
90335 |
+ |
(AAT)n |
Simple_repeat |
| scaffold9482 |
90806 |
90847 |
+ |
(TATTTG)n |
Simple_repeat |
| scaffold9482 |
91670 |
91817 |
+ |
RS3549 |
Unspecified |
| scaffold9482 |
91922 |
92016 |
- |
RLG_scIvana_5_1-I |
LTR/Copia |
| scaffold9482 |
91984 |
92329 |
- |
Gypsy-185_ZM-I |
LTR/Gypsy |
| scaffold9482 |
92991 |
93093 |
+ |
RS13952 |
Unspecified |
| scaffold9482 |
95005 |
96344 |
+ |
Gypsy-5_Pru-I |
LTR/Gypsy |
| scaffold9482 |
98713 |
98771 |
+ |
(TT)n |
Simple_repeat |
| scaffold9482 |
98812 |
98845 |
+ |
(T)n |
Simple_repeat |
| scaffold9482 |
99325 |
99367 |
+ |
(GGCGAG)n |
Simple_repeat |
| scaffold9482 |
99424 |
99445 |
+ |
(T)n |
Simple_repeat |
| scaffold9482 |
99900 |
99973 |
+ |
A-rich |
Low_complexity |
| scaffold9482 |
100848 |
100871 |
+ |
(TA)n |
Simple_repeat |
| scaffold9482 |
101142 |
101163 |
+ |
(ATT)n |
Simple_repeat |
| scaffold9482 |
105304 |
105375 |
- |
LINE1-55_SBi |
LINE/L1 |
| scaffold9482 |
105542 |
105616 |
- |
RS13353 |
Unspecified |
| scaffold9482 |
106728 |
106781 |
+ |
(TGAT)n |
Simple_repeat |
| scaffold9482 |
107106 |
107143 |
+ |
(CAACC)n |
Simple_repeat |
| scaffold9482 |
107239 |
107248 |
+ |
(TATA)n |
Simple_repeat |
| scaffold9482 |
107249 |
107279 |
+ |
(ATCTAT)n |
Simple_repeat |
| scaffold9482 |
107280 |
107285 |
+ |
(TATA)n |
Simple_repeat |
| scaffold9482 |
109003 |
109171 |
- |
L1-4_VC |
LINE/L1 |
| scaffold9482 |
110168 |
110185 |
+ |
(A)n |
Simple_repeat |
| scaffold9482 |
113986 |
114023 |
+ |
(ACA)n |
Simple_repeat |
| scaffold9482 |
114028 |
114072 |
- |
SINE2-1_PD |
SINE/tRNA-RTE |
| scaffold9482 |
114759 |
114779 |
+ |
(T)n |
Simple_repeat |
| scaffold9482 |
115578 |
115625 |
+ |
(T)n |
Simple_repeat |
| scaffold9482 |
116124 |
116212 |
+ |
RS1224 |
Unspecified |
| scaffold9482 |
116363 |
116470 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold9482 |
116363 |
116423 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold9482 |
116394 |
116470 |
- |
RS1307 |
Unspecified |
| scaffold9482 |
116974 |
117020 |
+ |
(AGAAGGT)n |
Simple_repeat |
| scaffold9482 |
117229 |
117250 |
+ |
(A)n |
Simple_repeat |
| scaffold9482 |
117284 |
117366 |
- |
tRNASAT-1_ZM |
Satellite |
| scaffold9482 |
118328 |
118347 |
+ |
(T)n |
Simple_repeat |
| scaffold9482 |
120363 |
120370 |
+ |
(TATTT)n |
Simple_repeat |
| scaffold9482 |
120371 |
120405 |
+ |
(T)n |
Simple_repeat |
| scaffold9482 |
120406 |
120422 |
+ |
(TATTT)n |
Simple_repeat |
| scaffold9482 |
121174 |
121251 |
+ |
(T)n |
Simple_repeat |
| scaffold9482 |
122122 |
122150 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold9482 |
123232 |
123285 |
+ |
A-rich |
Low_complexity |
| scaffold9482 |
123923 |
123999 |
+ |
(A)n |
Simple_repeat |
| scaffold9482 |
124621 |
124661 |
+ |
(CTTTTTT)n |
Simple_repeat |
| scaffold9482 |
124841 |
124956 |
+ |
EnSpm-34_SBi |
DNA/CMC-EnSpm |
| scaffold9482 |
125350 |
125383 |
+ |
(TTCAA)n |
Simple_repeat |
| scaffold9482 |
125520 |
125613 |
+ |
RS13929 |
Unspecified |
| scaffold9482 |
125806 |
125839 |
+ |
(TATATT)n |
Simple_repeat |
| scaffold9482 |
127611 |
127635 |
+ |
(T)n |
Simple_repeat |
| scaffold9482 |
131957 |
132141 |
+ |
GA-rich |
Low_complexity |
| scaffold9482 |
134976 |
135031 |
+ |
A-rich |
Low_complexity |
| scaffold9482 |
135272 |
135301 |
+ |
(TGA)n |
Simple_repeat |
| scaffold9482 |
135725 |
135865 |
+ |
RS1210 |
Unspecified |