scaffold9572 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold9572 |
1 |
748 |
+ |
Gypsy-72-LTR_ZM |
LTR/Gypsy |
| scaffold9572 |
609 |
748 |
+ |
Gypsy-72-LTR_ZM |
LTR/Gypsy |
| scaffold9572 |
746 |
1417 |
+ |
PL969 |
Unspecified |
| scaffold9572 |
1505 |
1573 |
+ |
(TTTTTAA)n |
Simple_repeat |
| scaffold9572 |
1860 |
1901 |
+ |
(TAATTTA)n |
Simple_repeat |
| scaffold9572 |
2016 |
2048 |
+ |
(TATTTT)n |
Simple_repeat |
| scaffold9572 |
2016 |
2433 |
+ |
(TATTTT)n |
Simple_repeat |
| scaffold9572 |
2032 |
2433 |
+ |
PL785 |
Unspecified |
| scaffold9572 |
2783 |
3268 |
+ |
RS3091 |
Unspecified |
| scaffold9572 |
3683 |
3748 |
+ |
(TAA)n |
Simple_repeat |
| scaffold9572 |
3757 |
4315 |
- |
PL920 |
Unspecified |
| scaffold9572 |
4397 |
4426 |
+ |
(TTG)n |
Simple_repeat |
| scaffold9572 |
4898 |
5047 |
+ |
(CCGGA)n |
Simple_repeat |
| scaffold9572 |
6071 |
6137 |
+ |
(TAATT)n |
Simple_repeat |
| scaffold9572 |
6483 |
7215 |
+ |
LINE1I_MT |
LINE/L1 |
| scaffold9572 |
7546 |
8820 |
+ |
RS288 |
Unspecified |
| scaffold9572 |
9855 |
9873 |
+ |
(A)n |
Simple_repeat |
| scaffold9572 |
9915 |
9985 |
+ |
A-rich |
Low_complexity |
| scaffold9572 |
10243 |
10264 |
+ |
(T)n |
Simple_repeat |
| scaffold9572 |
11739 |
11769 |
+ |
(TTATTT)n |
Simple_repeat |
| scaffold9572 |
13178 |
13201 |
+ |
(T)n |
Simple_repeat |
| scaffold9572 |
14141 |
14165 |
+ |
(TTA)n |
Simple_repeat |
| scaffold9572 |
16015 |
16038 |
+ |
(A)n |
Simple_repeat |
| scaffold9572 |
16958 |
16989 |
+ |
(T)n |
Simple_repeat |
| scaffold9572 |
17213 |
17593 |
+ |
PL914 |
Unspecified |
| scaffold9572 |
17258 |
17774 |
- |
PL318 |
Unspecified |
| scaffold9572 |
17899 |
18055 |
- |
RS1301 |
Unspecified |
| scaffold9572 |
19052 |
19119 |
+ |
A-rich |
Low_complexity |
| scaffold9572 |
19059 |
19118 |
+ |
GA-rich |
Low_complexity |
| scaffold9572 |
19381 |
20009 |
+ |
Copia-84_VV-I |
LTR/Copia |
| scaffold9572 |
20024 |
20082 |
+ |
(TTAAT)n |
Simple_repeat |
| scaffold9572 |
20525 |
20556 |
+ |
(TATTT)n |
Simple_repeat |
| scaffold9572 |
21094 |
21141 |
+ |
A-rich |
Low_complexity |
| scaffold9572 |
21583 |
21705 |
+ |
(ATACTTT)n |
Simple_repeat |
| scaffold9572 |
22922 |
22961 |
+ |
A-rich |
Low_complexity |
| scaffold9572 |
24380 |
24407 |
+ |
(A)n |
Simple_repeat |
| scaffold9572 |
24901 |
25400 |
+ |
PL528 |
Unspecified |
| scaffold9572 |
28040 |
28069 |
+ |
(A)n |
Simple_repeat |
| scaffold9572 |
29613 |
29659 |
- |
Gypsy42-ZM_I-int |
LTR/Gypsy |
| scaffold9572 |
29882 |
29951 |
+ |
(TTTTTT)n |
Simple_repeat |
| scaffold9572 |
31748 |
31775 |
+ |
A-rich |
Low_complexity |
| scaffold9572 |
34654 |
34791 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold9572 |
34942 |
35243 |
+ |
RS468 |
Unspecified |
| scaffold9572 |
35289 |
35340 |
+ |
(AT)n |
Simple_repeat |
| scaffold9572 |
35396 |
35415 |
+ |
(A)n |
Simple_repeat |
| scaffold9572 |
35798 |
35816 |
+ |
(A)n |
Simple_repeat |
| scaffold9572 |
36448 |
36471 |
+ |
(A)n |
Simple_repeat |
| scaffold9572 |
37032 |
37061 |
+ |
G-rich |
Low_complexity |
| scaffold9572 |
37460 |
37491 |
+ |
A-rich |
Low_complexity |
| scaffold9572 |
37774 |
37882 |
+ |
SHALINE16_MT |
LINE/L1 |
| scaffold9572 |
38124 |
38346 |
+ |
L1-16_Mad |
LINE/L1 |
| scaffold9572 |
38589 |
39687 |
- |
RS655 |
Unspecified |
| scaffold9572 |
38714 |
39547 |
- |
RS1330 |
Unspecified |
| scaffold9572 |
39819 |
40127 |
- |
RS832 |
Unspecified |
| scaffold9572 |
40440 |
40488 |
+ |
(ATTAT)n |
Simple_repeat |
| scaffold9572 |
40712 |
40788 |
+ |
(AATTAAT)n |
Simple_repeat |
| scaffold9572 |
40916 |
40966 |
+ |
(TCATT)n |
Simple_repeat |
| scaffold9572 |
41006 |
41042 |
+ |
(CAA)n |
Simple_repeat |
| scaffold9572 |
41043 |
41180 |
+ |
(AAT)n |
Simple_repeat |
| scaffold9572 |
41181 |
41260 |
+ |
(CAA)n |
Simple_repeat |
| scaffold9572 |
41264 |
41332 |
+ |
(GCCACC)n |
Simple_repeat |
| scaffold9572 |
44424 |
45331 |
+ |
RS936 |
Unspecified |
| scaffold9572 |
45402 |
45494 |
- |
RS13 |
Unspecified |
| scaffold9572 |
45959 |
46014 |
+ |
(TATAACA)n |
Simple_repeat |
| scaffold9572 |
46784 |
46829 |
+ |
(AAT)n |
Simple_repeat |
| scaffold9572 |
47716 |
47761 |
+ |
GA-rich |
Low_complexity |
| scaffold9572 |
47938 |
50003 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold9572 |
47938 |
49979 |
- |
RIRE1_I-int |
LTR/Copia |
| scaffold9572 |
49350 |
50003 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold9572 |
49372 |
49979 |
- |
RIRE1_I-int |
LTR/Copia |
| scaffold9572 |
50499 |
50556 |
+ |
(TATAAT)n |
Simple_repeat |
| scaffold9572 |
51515 |
51566 |
- |
Copia25-PTR_I-int |
LTR/Copia |