scaffold9576 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold9576 |
136 |
256 |
+ |
Copia-62_GM-LTR |
LTR/Copia |
| scaffold9576 |
1645 |
1712 |
- |
PL208 |
Unspecified |
| scaffold9576 |
1658 |
1712 |
- |
RS7400 |
Unspecified |
| scaffold9576 |
1693 |
1893 |
+ |
RS10815 |
Unspecified |
| scaffold9576 |
2402 |
2436 |
+ |
A-rich |
Low_complexity |
| scaffold9576 |
2821 |
3202 |
+ |
RS10815 |
Unspecified |
| scaffold9576 |
4448 |
4520 |
+ |
(ACACAA)n |
Simple_repeat |
| scaffold9576 |
4714 |
4752 |
+ |
A-rich |
Low_complexity |
| scaffold9576 |
5670 |
5701 |
+ |
(TCAGCC)n |
Simple_repeat |
| scaffold9576 |
5721 |
5818 |
+ |
(GCA)n |
Simple_repeat |
| scaffold9576 |
6073 |
6120 |
+ |
(TCGGCC)n |
Simple_repeat |
| scaffold9576 |
6339 |
6959 |
- |
RS1027 |
Unspecified |
| scaffold9576 |
7182 |
7933 |
- |
RS67 |
Unspecified |
| scaffold9576 |
8995 |
10152 |
+ |
RS247 |
Unspecified |
| scaffold9576 |
10327 |
10369 |
+ |
A-rich |
Low_complexity |
| scaffold9576 |
11652 |
11787 |
- |
RS412 |
Unspecified |
| scaffold9576 |
11841 |
12802 |
- |
PL530 |
Unspecified |
| scaffold9576 |
13834 |
13953 |
+ |
(CAA)n |
Simple_repeat |
| scaffold9576 |
14017 |
14183 |
+ |
(CAA)n |
Simple_repeat |
| scaffold9576 |
14547 |
14919 |
+ |
PL255 |
Unspecified |
| scaffold9576 |
14946 |
15013 |
- |
Copia25-PTR_I-int |
LTR/Copia |
| scaffold9576 |
16114 |
16197 |
+ |
A-rich |
Low_complexity |
| scaffold9576 |
20963 |
20996 |
+ |
(TTGAAT)n |
Simple_repeat |
| scaffold9576 |
22032 |
22787 |
+ |
gypsy |
gypsy(TransposonPSI) |
| scaffold9576 |
22224 |
22279 |
+ |
A-rich |
Low_complexity |
| scaffold9576 |
22490 |
22773 |
+ |
Gypsy-I_MT |
LTR/Gypsy |
| scaffold9576 |
22770 |
23077 |
+ |
RS155 |
Unspecified |
| scaffold9576 |
23077 |
23144 |
+ |
(TTTAG)n |
Simple_repeat |
| scaffold9576 |
23186 |
23818 |
+ |
RS100 |
Unspecified |
| scaffold9576 |
23796 |
24712 |
+ |
OGRE-I_PS |
LTR/Gypsy |
| scaffold9576 |
24761 |
25367 |
- |
RS1117 |
Unspecified |
| scaffold9576 |
25797 |
25865 |
+ |
Gypsy-11_Pru-I |
LTR/Gypsy |
| scaffold9576 |
25956 |
26022 |
+ |
Atlantys1_I-int |
LTR/Gypsy |
| scaffold9576 |
26280 |
26316 |
+ |
(A)n |
Simple_repeat |
| scaffold9576 |
26786 |
26934 |
+ |
GYPSY3-I_MT |
LTR/Gypsy |
| scaffold9576 |
26971 |
27368 |
+ |
GYPSY3-I_MT |
LTR/Gypsy |
| scaffold9576 |
27822 |
28027 |
+ |
RS3130 |
Unspecified |
| scaffold9576 |
28027 |
28317 |
+ |
RS265 |
Unspecified |
| scaffold9576 |
28496 |
28545 |
+ |
A-rich |
Low_complexity |
| scaffold9576 |
32078 |
32102 |
+ |
(CT)n |
Simple_repeat |
| scaffold9576 |
32146 |
32893 |
- |
RS1560 |
Unspecified |
| scaffold9576 |
34527 |
34753 |
- |
RS2145 |
Unspecified |
| scaffold9576 |
34573 |
34943 |
+ |
RS703 |
Unspecified |
| scaffold9576 |
37961 |
38021 |
+ |
(A)n |
Simple_repeat |
| scaffold9576 |
38253 |
38288 |
+ |
(T)n |
Simple_repeat |
| scaffold9576 |
40824 |
40902 |
+ |
(TTA)n |
Simple_repeat |
| scaffold9576 |
41116 |
41375 |
- |
RS237 |
Unspecified |
| scaffold9576 |
41625 |
41667 |
+ |
A-rich |
Low_complexity |
| scaffold9576 |
42013 |
42106 |
+ |
A-rich |
Low_complexity |
| scaffold9576 |
42240 |
42270 |
+ |
(ATTAA)n |
Simple_repeat |
| scaffold9576 |
42434 |
42475 |
+ |
A-rich |
Low_complexity |
| scaffold9576 |
42455 |
42477 |
+ |
(A)n |
Simple_repeat |
| scaffold9576 |
43096 |
43420 |
- |
RS1490 |
Unspecified |
| scaffold9576 |
43857 |
44237 |
- |
Copia-65_Mad-I |
LTR/Copia |
| scaffold9576 |
45327 |
45701 |
- |
RS1279 |
Unspecified |
| scaffold9576 |
46118 |
46349 |
+ |
RS7735 |
Unspecified |
| scaffold9576 |
46380 |
47176 |
- |
RS4270 |
Unspecified |
| scaffold9576 |
46838 |
47226 |
+ |
RS4732 |
Unspecified |
| scaffold9576 |
47395 |
47489 |
+ |
RS16382 |
Unspecified |
| scaffold9576 |
47933 |
48145 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold9576 |
48784 |
48814 |
+ |
(A)n |
Simple_repeat |
| scaffold9576 |
49656 |
49688 |
+ |
(TAT)n |
Simple_repeat |
| scaffold9576 |
49893 |
49989 |
- |
RS16382 |
Unspecified |
| scaffold9576 |
49899 |
50002 |
- |
PL436 |
Unspecified |
| scaffold9576 |
50365 |
50618 |
- |
RS356 |
Unspecified |
| scaffold9576 |
50641 |
50666 |
+ |
(ATTTT)n |
Simple_repeat |
| scaffold9576 |
50734 |
50848 |
- |
RS5935 |
Unspecified |
| scaffold9576 |
50748 |
50896 |
- |
RS1798 |
Unspecified |
| scaffold9576 |
50902 |
50929 |
+ |
(TTAGT)n |
Simple_repeat |
| scaffold9576 |
50918 |
50972 |
+ |
(T)n |
Simple_repeat |
| scaffold9576 |
51066 |
51417 |
+ |
RS600 |
Unspecified |
| scaffold9576 |
52340 |
52834 |
- |
PL6 |
Unspecified |
| scaffold9576 |
53247 |
53514 |
+ |
RS17600 |
Unspecified |
| scaffold9576 |
53476 |
53519 |
+ |
RS10 |
Unspecified |
| scaffold9576 |
53688 |
53818 |
+ |
RS1533 |
Unspecified |
| scaffold9576 |
53834 |
54105 |
- |
RS1 |
Unspecified |
| scaffold9576 |
54075 |
54111 |
+ |
RS1 |
Unspecified |
| scaffold9576 |
54104 |
54196 |
- |
RS356 |
Unspecified |
| scaffold9576 |
54399 |
54418 |
+ |
(T)n |
Simple_repeat |
| scaffold9576 |
54743 |
54954 |
+ |
RS4 |
Unspecified |
| scaffold9576 |
54945 |
55302 |
- |
RS42 |
Unspecified |
| scaffold9576 |
55316 |
55353 |
+ |
RS4 |
Unspecified |
| scaffold9576 |
56205 |
56451 |
- |
PL271 |
Unspecified |
| scaffold9576 |
56205 |
56415 |
+ |
PL271 |
Unspecified |
| scaffold9576 |
61317 |
61582 |
- |
RS42 |
Unspecified |
| scaffold9576 |
61471 |
61598 |
+ |
RS42 |
Unspecified |
| scaffold9576 |
61685 |
62228 |
- |
PL453 |
Unspecified |
| scaffold9576 |
62443 |
62474 |
+ |
A-rich |
Low_complexity |
| scaffold9576 |
62847 |
62878 |
+ |
(AAT)n |
Simple_repeat |
| scaffold9576 |
63074 |
63161 |
- |
PL276 |
Unspecified |
| scaffold9576 |
63084 |
63165 |
+ |
PL803 |
Unspecified |
| scaffold9576 |
63644 |
63795 |
+ |
PL669 |
Unspecified |
| scaffold9576 |
64745 |
65080 |
- |
RS48 |
Unspecified |
| scaffold9576 |
65122 |
65217 |
+ |
(TAA)n |
Simple_repeat |
| scaffold9576 |
65338 |
65492 |
+ |
(ATA)n |
Simple_repeat |
| scaffold9576 |
66707 |
67449 |
+ |
ATIS112A |
DNA/PIF-Harbinger |
| scaffold9576 |
67490 |
67715 |
+ |
RS49 |
Unspecified |
| scaffold9576 |
67793 |
67866 |
+ |
RS383 |
Unspecified |
| scaffold9576 |
68917 |
68947 |
+ |
(CTGTTT)n |
Simple_repeat |
| scaffold9576 |
69107 |
69397 |
- |
RS5106 |
Unspecified |
| scaffold9576 |
69180 |
69411 |
- |
RS7820 |
Unspecified |
| scaffold9576 |
69646 |
69707 |
+ |
(AATTTC)n |
Simple_repeat |
| scaffold9576 |
69857 |
70096 |
+ |
RS7792 |
Unspecified |
| scaffold9576 |
70199 |
70246 |
+ |
(AATAA)n |
Simple_repeat |
| scaffold9576 |
70336 |
70712 |
+ |
RS320 |
Unspecified |
| scaffold9576 |
70728 |
70899 |
+ |
HARB-N1_OS |
DNA/PIF-Harbinger |
| scaffold9576 |
71165 |
71223 |
+ |
(ATTTT)n |
Simple_repeat |
| scaffold9576 |
71776 |
71929 |
- |
RS5544 |
Unspecified |
| scaffold9576 |
71910 |
72214 |
- |
RS3048 |
Unspecified |
| scaffold9576 |
72110 |
72247 |
+ |
RS4668 |
Unspecified |
| scaffold9576 |
72478 |
72541 |
+ |
RS4668 |
Unspecified |
| scaffold9576 |
72598 |
72629 |
+ |
(TTTGAT)n |
Simple_repeat |
| scaffold9576 |
72598 |
72740 |
+ |
(TTTGAT)n |
Simple_repeat |
| scaffold9576 |
72624 |
72740 |
+ |
RS7805 |
Unspecified |
| scaffold9576 |
72746 |
72848 |
+ |
RS6280 |
Unspecified |
| scaffold9576 |
72948 |
73275 |
+ |
RS10781 |
Unspecified |
| scaffold9576 |
74200 |
74369 |
+ |
RS35 |
Unspecified |
| scaffold9576 |
75021 |
75103 |
+ |
GA-rich |
Low_complexity |
| scaffold9576 |
75287 |
75652 |
+ |
RS606 |
Unspecified |
| scaffold9576 |
75684 |
75722 |
+ |
(A)n |
Simple_repeat |
| scaffold9576 |
76435 |
76475 |
+ |
(AATA)n |
Simple_repeat |
| scaffold9576 |
76959 |
77057 |
+ |
(ATCTCTC)n |
Simple_repeat |
| scaffold9576 |
77293 |
77352 |
+ |
(ATTCTTG)n |
Simple_repeat |
| scaffold9576 |
77577 |
77837 |
+ |
PL836 |
Unspecified |
| scaffold9576 |
78524 |
78677 |
+ |
RS10714 |
Unspecified |
| scaffold9576 |
78600 |
78740 |
+ |
RS14210 |
Unspecified |
| scaffold9576 |
79369 |
79514 |
+ |
RS10004 |
Unspecified |
| scaffold9576 |
80097 |
80462 |
- |
RS5532 |
Unspecified |
| scaffold9576 |
80360 |
80501 |
- |
RS10851 |
Unspecified |
| scaffold9576 |
80535 |
80564 |
+ |
A-rich |
Low_complexity |
| scaffold9576 |
80640 |
80681 |
+ |
GA-rich |
Low_complexity |
| scaffold9576 |
81496 |
81527 |
+ |
G-rich |
Low_complexity |
| scaffold9576 |
82420 |
82437 |
+ |
(A)n |
Simple_repeat |
| scaffold9576 |
83221 |
83264 |
+ |
(TA)n |
Simple_repeat |
| scaffold9576 |
84416 |
84511 |
+ |
(AGTTC)n |
Simple_repeat |
| scaffold9576 |
84551 |
84614 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold9576 |
84731 |
84800 |
+ |
A-rich |
Low_complexity |
| scaffold9576 |
84851 |
84878 |
+ |
(ATAT)n |
Simple_repeat |
| scaffold9576 |
85324 |
85354 |
+ |
(AT)n |
Simple_repeat |
| scaffold9576 |
86050 |
86160 |
+ |
RS4303 |
Unspecified |
| scaffold9576 |
86079 |
86343 |
- |
RS3832 |
Unspecified |