scaffold9614 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold9614 |
1 |
217 |
- |
PL347 |
Unspecified |
| scaffold9614 |
2109 |
2508 |
- |
MuDR-9_ZM |
DNA/MULE-MuDR |
| scaffold9614 |
2513 |
3046 |
- |
MuDR-9_ZM |
DNA/MULE-MuDR |
| scaffold9614 |
3203 |
3326 |
- |
MuDR-9_ZM |
DNA/MULE-MuDR |
| scaffold9614 |
4062 |
4090 |
+ |
(T)n |
Simple_repeat |
| scaffold9614 |
4091 |
4111 |
+ |
(TATT)n |
Simple_repeat |
| scaffold9614 |
4343 |
4559 |
- |
RS580 |
Unspecified |
| scaffold9614 |
4749 |
4928 |
- |
RS459 |
Unspecified |
| scaffold9614 |
4928 |
4977 |
- |
RS580 |
Unspecified |
| scaffold9614 |
5538 |
5564 |
+ |
(AAATCA)n |
Simple_repeat |
| scaffold9614 |
6153 |
6169 |
+ |
(T)n |
Simple_repeat |
| scaffold9614 |
6681 |
6746 |
+ |
RS1049 |
Unspecified |
| scaffold9614 |
7720 |
7831 |
- |
RS6522 |
Unspecified |
| scaffold9614 |
8024 |
8219 |
- |
RS17980 |
Unspecified |
| scaffold9614 |
8910 |
9266 |
+ |
RIRE1_I-int |
LTR/Copia |
| scaffold9614 |
9936 |
9957 |
+ |
(A)n |
Simple_repeat |
| scaffold9614 |
10698 |
10754 |
+ |
A-rich |
Low_complexity |
| scaffold9614 |
11189 |
11242 |
+ |
A-rich |
Low_complexity |
| scaffold9614 |
11908 |
12003 |
+ |
(GTGGTGG)n |
Simple_repeat |
| scaffold9614 |
15110 |
15150 |
+ |
(CAC)n |
Simple_repeat |
| scaffold9614 |
15581 |
15648 |
+ |
DNA3-8_STu |
DNA |
| scaffold9614 |
15678 |
15711 |
+ |
(ATCATT)n |
Simple_repeat |
| scaffold9614 |
15804 |
15922 |
+ |
(CCG)n |
Simple_repeat |
| scaffold9614 |
15963 |
15999 |
+ |
(ATT)n |
Simple_repeat |
| scaffold9614 |
16007 |
16129 |
+ |
(CCG)n |
Simple_repeat |
| scaffold9614 |
16158 |
16199 |
+ |
(CTG)n |
Simple_repeat |
| scaffold9614 |
16648 |
16658 |
+ |
(ATTTA)n |
Simple_repeat |
| scaffold9614 |
16659 |
16681 |
+ |
(T)n |
Simple_repeat |
| scaffold9614 |
16724 |
16752 |
+ |
(T)n |
Simple_repeat |
| scaffold9614 |
16821 |
16855 |
+ |
(T)n |
Simple_repeat |
| scaffold9614 |
19179 |
19200 |
+ |
(T)n |
Simple_repeat |
| scaffold9614 |
19264 |
19304 |
+ |
(TCTGTT)n |
Simple_repeat |
| scaffold9614 |
21866 |
21888 |
+ |
(A)n |
Simple_repeat |
| scaffold9614 |
22280 |
22467 |
+ |
(CTGAA)n |
Simple_repeat |
| scaffold9614 |
28925 |
28969 |
- |
RS41 |
Unspecified |
| scaffold9614 |
28997 |
29036 |
- |
RS41 |
Unspecified |
| scaffold9614 |
29922 |
29938 |
+ |
(AAC)n |
Simple_repeat |
| scaffold9614 |
30157 |
30179 |
+ |
(T)n |
Simple_repeat |
| scaffold9614 |
30192 |
30230 |
+ |
(T)n |
Simple_repeat |
| scaffold9614 |
32066 |
32094 |
+ |
(GATAA)n |
Simple_repeat |
| scaffold9614 |
33320 |
33394 |
+ |
RS285 |
Unspecified |
| scaffold9614 |
33406 |
33459 |
+ |
RS285 |
Unspecified |
| scaffold9614 |
33460 |
33536 |
+ |
RS285 |
Unspecified |
| scaffold9614 |
33960 |
33990 |
+ |
(T)n |
Simple_repeat |
| scaffold9614 |
37091 |
37267 |
- |
RS459 |
Unspecified |
| scaffold9614 |
37271 |
37404 |
- |
RS459 |
Unspecified |
| scaffold9614 |
37473 |
37567 |
+ |
RS1674 |
Unspecified |
| scaffold9614 |
37873 |
37943 |
+ |
(ATTTTTT)n |
Simple_repeat |
| scaffold9614 |
38954 |
39000 |
+ |
(AATACA)n |
Simple_repeat |
| scaffold9614 |
39012 |
39093 |
+ |
(T)n |
Simple_repeat |
| scaffold9614 |
41888 |
41977 |
- |
PL561 |
Unspecified |
| scaffold9614 |
42729 |
42773 |
+ |
(ATTTA)n |
Simple_repeat |
| scaffold9614 |
43151 |
43197 |
+ |
A-rich |
Low_complexity |
| scaffold9614 |
43282 |
43310 |
+ |
(A)n |
Simple_repeat |
| scaffold9614 |
43520 |
43589 |
+ |
(CCG)n |
Simple_repeat |
| scaffold9614 |
43669 |
43701 |
+ |
(GAT)n |
Simple_repeat |
| scaffold9614 |
44609 |
44630 |
+ |
(T)n |
Simple_repeat |
| scaffold9614 |
46398 |
46438 |
+ |
SHACOP16_I_MT-int |
LTR/Copia |
| scaffold9614 |
46575 |
46641 |
+ |
(GAT)n |
Simple_repeat |
| scaffold9614 |
50355 |
50372 |
+ |
(TTG)n |
Simple_repeat |
| scaffold9614 |
50373 |
50399 |
+ |
(T)n |
Simple_repeat |
| scaffold9614 |
50400 |
50417 |
+ |
(TTG)n |
Simple_repeat |
| scaffold9614 |
50506 |
50588 |
+ |
(TGTTTTA)n |
Simple_repeat |
| scaffold9614 |
53056 |
53072 |
+ |
(A)n |
Simple_repeat |
| scaffold9614 |
53114 |
53283 |
+ |
(CAGCT)n |
Simple_repeat |
| scaffold9614 |
53319 |
53351 |
+ |
(ATA)n |
Simple_repeat |
| scaffold9614 |
53387 |
53535 |
+ |
RS4835 |
Unspecified |
| scaffold9614 |
53546 |
53590 |
+ |
(TTATTTT)n |
Simple_repeat |
| scaffold9614 |
53870 |
53978 |
+ |
(TTA)n |
Simple_repeat |
| scaffold9614 |
53989 |
54090 |
+ |
(TAT)n |
Simple_repeat |
| scaffold9614 |
54115 |
54242 |
+ |
RS13610 |
Unspecified |
| scaffold9614 |
54116 |
54215 |
+ |
PL517 |
Unspecified |
| scaffold9614 |
54577 |
54685 |
+ |
RS18316 |
Unspecified |
| scaffold9614 |
54788 |
54805 |
+ |
(TCA)n |
Simple_repeat |
| scaffold9614 |
55172 |
55399 |
- |
ISC1316 |
ISC1316(TransposonPSI) |
| scaffold9614 |
55294 |
55363 |
+ |
(T)n |
Simple_repeat |
| scaffold9614 |
58286 |
58337 |
+ |
(TAT)n |
Simple_repeat |
| scaffold9614 |
58362 |
58489 |
+ |
RS13610 |
Unspecified |
| scaffold9614 |
58363 |
58462 |
+ |
PL517 |
Unspecified |
| scaffold9614 |
58824 |
58932 |
+ |
RS18316 |
Unspecified |
| scaffold9614 |
59035 |
59052 |
+ |
(TCA)n |
Simple_repeat |
| scaffold9614 |
59541 |
59610 |
+ |
(T)n |
Simple_repeat |
| scaffold9614 |
59623 |
59659 |
+ |
RS14462 |
Unspecified |
| scaffold9614 |
61989 |
62107 |
- |
TRAMET1 |
DNA/TcMar-Stowaway |