scaffold9791 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold9791 |
221 |
291 |
+ |
(TAATA)n |
Simple_repeat |
| scaffold9791 |
746 |
810 |
- |
RETROSAT5_I-int |
LTR/Gypsy |
| scaffold9791 |
1093 |
1144 |
+ |
(AATTA)n |
Simple_repeat |
| scaffold9791 |
2578 |
2684 |
+ |
(ATAAGCAT)n |
Simple_repeat |
| scaffold9791 |
3596 |
4019 |
+ |
PL951 |
Unspecified |
| scaffold9791 |
3647 |
4468 |
+ |
A-rich |
Low_complexity |
| scaffold9791 |
4376 |
4468 |
+ |
A-rich |
Low_complexity |
| scaffold9791 |
4627 |
4668 |
+ |
A-rich |
Low_complexity |
| scaffold9791 |
6512 |
6726 |
+ |
RS30 |
Unspecified |
| scaffold9791 |
8083 |
8141 |
+ |
A-rich |
Low_complexity |
| scaffold9791 |
8949 |
8978 |
+ |
(CAAATC)n |
Simple_repeat |
| scaffold9791 |
9376 |
9408 |
+ |
(A)n |
Simple_repeat |
| scaffold9791 |
9439 |
9554 |
- |
LTR2-ZM_LTR |
LTR |
| scaffold9791 |
9695 |
9785 |
- |
LTR-7_Mad-LTR |
LTR |
| scaffold9791 |
10347 |
10373 |
+ |
(T)n |
Simple_repeat |
| scaffold9791 |
10428 |
10664 |
- |
RS106 |
Unspecified |
| scaffold9791 |
10748 |
10999 |
- |
RS777 |
Unspecified |
| scaffold9791 |
11391 |
11411 |
+ |
(T)n |
Simple_repeat |
| scaffold9791 |
11938 |
11970 |
+ |
(TAA)n |
Simple_repeat |
| scaffold9791 |
12222 |
12253 |
+ |
(ATTT)n |
Simple_repeat |
| scaffold9791 |
12251 |
12290 |
+ |
(TTACGAA)n |
Simple_repeat |
| scaffold9791 |
12487 |
12529 |
+ |
(CAC)n |
Simple_repeat |
| scaffold9791 |
12561 |
12811 |
+ |
RS3477 |
Unspecified |
| scaffold9791 |
12608 |
13012 |
+ |
RS2420 |
Unspecified |
| scaffold9791 |
13474 |
13696 |
+ |
RS4896 |
Unspecified |
| scaffold9791 |
13877 |
13954 |
+ |
(TTCTTTT)n |
Simple_repeat |
| scaffold9791 |
14037 |
14379 |
+ |
PL697 |
Unspecified |
| scaffold9791 |
16778 |
16906 |
+ |
(TTA)n |
Simple_repeat |
| scaffold9791 |
17163 |
17332 |
- |
RS507 |
Unspecified |
| scaffold9791 |
18459 |
18501 |
+ |
(ACAA)n |
Simple_repeat |
| scaffold9791 |
19680 |
19963 |
+ |
LTR2-ZM_LTR |
LTR |
| scaffold9791 |
20372 |
20405 |
- |
PL621 |
Unspecified |
| scaffold9791 |
20432 |
20511 |
+ |
(ATAATTA)n |
Simple_repeat |
| scaffold9791 |
20691 |
20726 |
+ |
(TA)n |
Simple_repeat |
| scaffold9791 |
20994 |
21023 |
+ |
(TA)n |
Simple_repeat |
| scaffold9791 |
21349 |
21583 |
+ |
RS376 |
Unspecified |
| scaffold9791 |
21734 |
21884 |
- |
ATCopia34_LTR |
LTR/Copia |
| scaffold9791 |
22013 |
22129 |
- |
Copia-2_SL-LTR |
LTR/Copia |
| scaffold9791 |
22196 |
22254 |
+ |
A-rich |
Low_complexity |
| scaffold9791 |
22282 |
22537 |
+ |
RS1 |
Unspecified |
| scaffold9791 |
23886 |
23906 |
+ |
(A)n |
Simple_repeat |
| scaffold9791 |
24453 |
24700 |
+ |
(A)n |
Simple_repeat |
| scaffold9791 |
24668 |
24700 |
+ |
(A)n |
Simple_repeat |
| scaffold9791 |
25329 |
25346 |
+ |
(A)n |
Simple_repeat |
| scaffold9791 |
26764 |
26790 |
+ |
(T)n |
Simple_repeat |
| scaffold9791 |
26791 |
26824 |
+ |
(ATTTTA)n |
Simple_repeat |
| scaffold9791 |
26972 |
27185 |
- |
Copia-3_PTri-I |
LTR/Copia |
| scaffold9791 |
27229 |
27631 |
- |
RS507 |
Unspecified |
| scaffold9791 |
28573 |
28615 |
+ |
(GGCC)n |
Simple_repeat |
| scaffold9791 |
28921 |
28992 |
- |
Gypsy-30_GM-I |
LTR/Gypsy |
| scaffold9791 |
29230 |
29280 |
+ |
(T)n |
Simple_repeat |
| scaffold9791 |
31116 |
31504 |
- |
Gypsy-30_GM-I |
LTR/Gypsy |
| scaffold9791 |
32365 |
32527 |
- |
Gypsy-30_GM-I |
LTR/Gypsy |
| scaffold9791 |
33208 |
33253 |
+ |
A-rich |
Low_complexity |
| scaffold9791 |
33899 |
33970 |
+ |
(ATAACA)n |
Simple_repeat |
| scaffold9791 |
34205 |
34247 |
+ |
(GGCC)n |
Simple_repeat |
| scaffold9791 |
34606 |
35159 |
+ |
Copia-4_SL-LTR |
LTR/Copia |
| scaffold9791 |
34783 |
35159 |
+ |
Copia-4_SL-LTR |
LTR/Copia |
| scaffold9791 |
36697 |
36721 |
+ |
(A)n |
Simple_repeat |
| scaffold9791 |
37041 |
37263 |
- |
RS4260 |
Unspecified |
| scaffold9791 |
37263 |
37476 |
+ |
RS4260 |
Unspecified |
| scaffold9791 |
37594 |
37635 |
+ |
A-rich |
Low_complexity |
| scaffold9791 |
37796 |
37823 |
+ |
(T)n |
Simple_repeat |
| scaffold9791 |
38672 |
38719 |
+ |
(TTATT)n |
Simple_repeat |
| scaffold9791 |
39150 |
39425 |
- |
RS3844 |
Unspecified |
| scaffold9791 |
39431 |
39462 |
+ |
(TAAA)n |
Simple_repeat |
| scaffold9791 |
40114 |
40475 |
- |
RS12787 |
Unspecified |
| scaffold9791 |
40549 |
40775 |
+ |
RS4296 |
Unspecified |
| scaffold9791 |
41275 |
41646 |
+ |
RS614 |
Unspecified |
| scaffold9791 |
41949 |
41984 |
+ |
A-rich |
Low_complexity |
| scaffold9791 |
42353 |
42616 |
- |
RS356 |
Unspecified |
| scaffold9791 |
42731 |
42777 |
- |
HADES_TA |
DNA/TcMar-Stowaway |
| scaffold9791 |
42966 |
43024 |
+ |
STOWAWAY2_SB |
DNA/TcMar-Stowaway |
| scaffold9791 |
43025 |
43068 |
+ |
(TATAT)n |
Simple_repeat |
| scaffold9791 |
43291 |
43322 |
+ |
(TCTCTT)n |
Simple_repeat |
| scaffold9791 |
43370 |
43397 |
+ |
(CTT)n |
Simple_repeat |
| scaffold9791 |
43568 |
43590 |
+ |
(T)n |
Simple_repeat |
| scaffold9791 |
46714 |
46970 |
- |
RS47 |
Unspecified |
| scaffold9791 |
49850 |
50288 |
- |
RS3664 |
Unspecified |
| scaffold9791 |
50292 |
50331 |
+ |
(GTATTTT)n |
Simple_repeat |
| scaffold9791 |
53230 |
53265 |
+ |
(ACTTTAA)n |
Simple_repeat |
| scaffold9791 |
53872 |
54201 |
- |
RS585 |
Unspecified |
| scaffold9791 |
54222 |
54686 |
- |
RS4957 |
Unspecified |
| scaffold9791 |
54725 |
55048 |
+ |
RS224 |
Unspecified |
| scaffold9791 |
55132 |
55148 |
+ |
(A)n |
Simple_repeat |
| scaffold9791 |
55394 |
55603 |
+ |
RS1566 |
Unspecified |
| scaffold9791 |
55639 |
55962 |
+ |
RS224 |
Unspecified |
| scaffold9791 |
56897 |
56936 |
+ |
(T)n |
Simple_repeat |
| scaffold9791 |
56937 |
56944 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold9791 |
57588 |
57621 |
+ |
(T)n |
Simple_repeat |
| scaffold9791 |
58553 |
58720 |
- |
RS12026 |
Unspecified |
| scaffold9791 |
58723 |
58749 |
+ |
(T)n |
Simple_repeat |
| scaffold9791 |
59450 |
59706 |
- |
Gypsy-34_VV-I |
LTR/Gypsy |
| scaffold9791 |
59934 |
60234 |
- |
RS4957 |
Unspecified |
| scaffold9791 |
60235 |
60821 |
+ |
(ATTATA)n |
Simple_repeat |
| scaffold9791 |
60777 |
60821 |
+ |
(ATTATA)n |
Simple_repeat |
| scaffold9791 |
60864 |
61057 |
- |
PL658 |
Unspecified |
| scaffold9791 |
60901 |
61042 |
- |
PL561 |
Unspecified |
| scaffold9791 |
61803 |
61969 |
+ |
(AGCTG)n |
Simple_repeat |
| scaffold9791 |
62462 |
62495 |
+ |
(AATAAT)n |
Simple_repeat |
| scaffold9791 |
62506 |
62682 |
+ |
(AGCTG)n |
Simple_repeat |
| scaffold9791 |
62770 |
62820 |
+ |
(TGTAAC)n |
Simple_repeat |
| scaffold9791 |
62949 |
63098 |
- |
SHAMET |
DNA/TcMar-Stowaway |
| scaffold9791 |
64424 |
64479 |
+ |
A-rich |
Low_complexity |
| scaffold9791 |
66334 |
66360 |
+ |
(GAG)n |
Simple_repeat |
| scaffold9791 |
66522 |
66543 |
+ |
(T)n |
Simple_repeat |
| scaffold9791 |
66659 |
66699 |
+ |
(T)n |
Simple_repeat |
| scaffold9791 |
66762 |
66799 |
+ |
(T)n |
Simple_repeat |
| scaffold9791 |
66970 |
67573 |
+ |
PL757 |
Unspecified |
| scaffold9791 |
67304 |
67618 |
+ |
RS1716 |
Unspecified |
| scaffold9791 |
67797 |
68090 |
+ |
RS729 |
Unspecified |
| scaffold9791 |
68063 |
68099 |
- |
RS1638 |
Unspecified |
| scaffold9791 |
68105 |
68436 |
+ |
(GAACAAT)n |
Simple_repeat |
| scaffold9791 |
68391 |
68436 |
+ |
(GAACAAT)n |
Simple_repeat |
| scaffold9791 |
68640 |
68702 |
- |
PL640 |
Unspecified |
| scaffold9791 |
69420 |
69517 |
+ |
RS7869 |
Unspecified |
| scaffold9791 |
69585 |
69608 |
+ |
(CTTT)n |
Simple_repeat |
| scaffold9791 |
72125 |
73094 |
+ |
L1-1_GM |
LINE/L1 |
| scaffold9791 |
74245 |
74544 |
+ |
RS7869 |
Unspecified |
| scaffold9791 |
74856 |
74999 |
+ |
EnSpm-6_STu |
DNA/CMC-EnSpm |
| scaffold9791 |
75072 |
76977 |
+ |
EnSpm-3_STu |
DNA/CMC-EnSpm |
| scaffold9791 |
77535 |
77830 |
+ |
EnSpm-2_STu |
DNA/CMC-EnSpm |
| scaffold9791 |
77986 |
78143 |
+ |
(CGA)n |
Simple_repeat |
| scaffold9791 |
78141 |
78499 |
- |
RS2480 |
Unspecified |
| scaffold9791 |
78241 |
80565 |
+ |
RS7869 |
Unspecified |
| scaffold9791 |
80891 |
80935 |
+ |
A-rich |
Low_complexity |
| scaffold9791 |
81041 |
81077 |
+ |
(TTTTTC)n |
Simple_repeat |
| scaffold9791 |
81227 |
81579 |
- |
RS623 |
Unspecified |
| scaffold9791 |
81580 |
81731 |
+ |
RS176 |
Unspecified |
| scaffold9791 |
81605 |
81962 |
+ |
RS3734 |
Unspecified |
| scaffold9791 |
82404 |
82787 |
- |
Copia-65_Mad-I |
LTR/Copia |
| scaffold9791 |
83263 |
83291 |
+ |
(ATT)n |
Simple_repeat |
| scaffold9791 |
83292 |
83385 |
+ |
(ATA)n |
Simple_repeat |
| scaffold9791 |
83386 |
83443 |
+ |
(ATT)n |
Simple_repeat |
| scaffold9791 |
83663 |
83716 |
+ |
(AATCT)n |
Simple_repeat |
| scaffold9791 |
84005 |
84031 |
+ |
(A)n |
Simple_repeat |
| scaffold9791 |
84612 |
84657 |
+ |
(TATTTA)n |
Simple_repeat |
| scaffold9791 |
84905 |
85214 |
- |
PL9 |
Unspecified |
| scaffold9791 |
85568 |
85607 |
+ |
(TCCCT)n |
Simple_repeat |
| scaffold9791 |
85967 |
86055 |
- |
PL296 |
Unspecified |
| scaffold9791 |
86156 |
86414 |
+ |
RS1943 |
Unspecified |
| scaffold9791 |
89818 |
89981 |
- |
PL296 |
Unspecified |
| scaffold9791 |
89984 |
90054 |
+ |
PL169 |
Unspecified |
| scaffold9791 |
90436 |
90769 |
+ |
RS1110 |
Unspecified |
| scaffold9791 |
90900 |
90950 |
+ |
(AGTTTG)n |
Simple_repeat |
| scaffold9791 |
97807 |
97870 |
+ |
ENSPM2_VV |
DNA/CMC-EnSpm |
| scaffold9791 |
98869 |
98909 |
+ |
(TGTGAA)n |
Simple_repeat |
| scaffold9791 |
98966 |
99085 |
- |
RS1424 |
Unspecified |
| scaffold9791 |
99573 |
100361 |
+ |
RS49 |
Unspecified |
| scaffold9791 |
100363 |
100452 |
+ |
RS246 |
Unspecified |
| scaffold9791 |
100878 |
101398 |
+ |
RS3214 |
Unspecified |
| scaffold9791 |
102250 |
102313 |
+ |
(TGATAT)n |
Simple_repeat |
| scaffold9791 |
102807 |
103349 |
- |
RS299 |
Unspecified |
| scaffold9791 |
103803 |
103880 |
+ |
Gypsy-9_EPa-I |
LTR/Gypsy |
| scaffold9791 |
103803 |
104321 |
+ |
Gypsy-9_EPa-I |
LTR/Gypsy |
| scaffold9791 |
103849 |
104321 |
+ |
RS392 |
Unspecified |
| scaffold9791 |
104314 |
104600 |
- |
PL749 |
Unspecified |
| scaffold9791 |
104602 |
104847 |
+ |
RS4 |
Unspecified |
| scaffold9791 |
104854 |
104889 |
+ |
(ATAAAA)n |
Simple_repeat |
| scaffold9791 |
105037 |
105068 |
+ |
GA-rich |
Low_complexity |
| scaffold9791 |
106136 |
106962 |
- |
RS1894 |
Unspecified |
| scaffold9791 |
106861 |
107085 |
- |
RS783 |
Unspecified |
| scaffold9791 |
107083 |
107171 |
- |
RS1066 |
Unspecified |
| scaffold9791 |
108929 |
108980 |
+ |
(CAACT)n |
Simple_repeat |
| scaffold9791 |
109399 |
109470 |
+ |
(CAAT)n |
Simple_repeat |
| scaffold9791 |
109664 |
109726 |
+ |
RS168 |
Unspecified |
| scaffold9791 |
109792 |
109856 |
+ |
LINE1-31_SBi |
LINE/L1 |
| scaffold9791 |
110992 |
111077 |
+ |
A-rich |
Low_complexity |
| scaffold9791 |
111660 |
111710 |
+ |
(CTTT)n |
Simple_repeat |