scaffold9826 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold9826 |
2225 |
3670 |
+ |
LINE |
LINE(TransposonPSI) |
| scaffold9826 |
2347 |
2412 |
+ |
VLINE2_VV |
LINE/L1 |
| scaffold9826 |
2633 |
3494 |
+ |
L1-1_GM |
LINE/L1 |
| scaffold9826 |
3801 |
3965 |
+ |
VLINE6_VV |
LINE/L1 |
| scaffold9826 |
4178 |
4362 |
+ |
L1-6_STu |
LINE/L1 |
| scaffold9826 |
4505 |
4625 |
- |
RS2748 |
Unspecified |
| scaffold9826 |
4950 |
5000 |
+ |
(T)n |
Simple_repeat |
| scaffold9826 |
5213 |
5267 |
+ |
(TATTAA)n |
Simple_repeat |
| scaffold9826 |
5412 |
5433 |
+ |
(T)n |
Simple_repeat |
| scaffold9826 |
5622 |
5638 |
+ |
(T)n |
Simple_repeat |
| scaffold9826 |
5688 |
5789 |
- |
RS2090 |
Unspecified |
| scaffold9826 |
6489 |
6618 |
- |
PL159 |
Unspecified |
| scaffold9826 |
6819 |
6880 |
+ |
GA-rich |
Low_complexity |
| scaffold9826 |
7070 |
7108 |
+ |
(TTTAGT)n |
Simple_repeat |
| scaffold9826 |
7263 |
7293 |
+ |
(TAT)n |
Simple_repeat |
| scaffold9826 |
9198 |
9251 |
+ |
Alfare1_I-int |
LTR/Copia? |
| scaffold9826 |
9205 |
9314 |
+ |
Athila8A_I-int |
LTR/Gypsy |
| scaffold9826 |
9388 |
9410 |
+ |
(A)n |
Simple_repeat |
| scaffold9826 |
9493 |
9560 |
+ |
(A)n |
Simple_repeat |
| scaffold9826 |
10498 |
10568 |
+ |
Gypsy-10_Mad-I |
LTR/Gypsy |
| scaffold9826 |
10573 |
10716 |
+ |
Ogre-MT3_I-int |
LTR/Gypsy |
| scaffold9826 |
11322 |
11361 |
+ |
Gypsy-120_SB-I |
LTR/Gypsy |
| scaffold9826 |
12688 |
12854 |
- |
SHACOP15_LTR_MT |
LTR/Copia |
| scaffold9826 |
13602 |
13635 |
+ |
(AAGAT)n |
Simple_repeat |
| scaffold9826 |
13939 |
14289 |
+ |
PL231 |
Unspecified |
| scaffold9826 |
16207 |
16271 |
+ |
RETROSAT5_I-int |
LTR/Gypsy |
| scaffold9826 |
16274 |
16324 |
+ |
(AATTT)n |
Simple_repeat |
| scaffold9826 |
16400 |
16439 |
+ |
(TTTTAT)n |
Simple_repeat |
| scaffold9826 |
16855 |
16924 |
+ |
(AAT)n |
Simple_repeat |
| scaffold9826 |
16928 |
16992 |
+ |
(ACT)n |
Simple_repeat |
| scaffold9826 |
17304 |
17437 |
- |
RS2963 |
Unspecified |
| scaffold9826 |
17359 |
17460 |
- |
PL785 |
Unspecified |
| scaffold9826 |
19750 |
19792 |
+ |
PL571 |
Unspecified |
| scaffold9826 |
20817 |
20878 |
+ |
(CAA)n |
Simple_repeat |
| scaffold9826 |
20956 |
21144 |
+ |
RS90 |
Unspecified |
| scaffold9826 |
22612 |
22643 |
+ |
(ACA)n |
Simple_repeat |
| scaffold9826 |
22757 |
22915 |
+ |
RS90 |
Unspecified |
| scaffold9826 |
22883 |
22952 |
+ |
A-rich |
Low_complexity |
| scaffold9826 |
22909 |
23006 |
- |
RS644 |
Unspecified |
| scaffold9826 |
23179 |
23240 |
+ |
A-rich |
Low_complexity |
| scaffold9826 |
23367 |
23384 |
+ |
(A)n |
Simple_repeat |
| scaffold9826 |
23593 |
23784 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold9826 |
23843 |
24085 |
- |
RS4 |
Unspecified |
| scaffold9826 |
24176 |
24303 |
+ |
(ATA)n |
Simple_repeat |
| scaffold9826 |
26252 |
26850 |
- |
RS379 |
Unspecified |
| scaffold9826 |
26853 |
26942 |
+ |
(TAA)n |
Simple_repeat |
| scaffold9826 |
26943 |
26975 |
+ |
(AGAT)n |
Simple_repeat |
| scaffold9826 |
27800 |
27845 |
+ |
(AAT)n |
Simple_repeat |
| scaffold9826 |
28420 |
28467 |
+ |
A-rich |
Low_complexity |
| scaffold9826 |
32093 |
32385 |
- |
RS90 |
Unspecified |
| scaffold9826 |
32726 |
33927 |
- |
Gypsy-20_BRa-I |
LTR/Gypsy |
| scaffold9826 |
33922 |
34368 |
- |
Gypsy-20_BRa-I |
LTR/Gypsy |
| scaffold9826 |
34682 |
34986 |
- |
Gypsy-20_BRa-I |
LTR/Gypsy |
| scaffold9826 |
35145 |
36480 |
- |
Atlantys1_I-int |
LTR/Gypsy |
| scaffold9826 |
36646 |
37264 |
- |
Gypsy-20_BRa-I |
LTR/Gypsy |