scaffold9877 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold9877 |
4 |
160 |
- |
PL748 |
Unspecified |
| scaffold9877 |
460 |
728 |
+ |
RS356 |
Unspecified |
| scaffold9877 |
1477 |
1518 |
+ |
(TTAGT)n |
Simple_repeat |
| scaffold9877 |
1739 |
2047 |
- |
RS48 |
Unspecified |
| scaffold9877 |
2265 |
2306 |
+ |
GA-rich |
Low_complexity |
| scaffold9877 |
6524 |
6865 |
- |
RS314 |
Unspecified |
| scaffold9877 |
7566 |
7607 |
+ |
(TTC)n |
Simple_repeat |
| scaffold9877 |
7824 |
7857 |
+ |
(TAT)n |
Simple_repeat |
| scaffold9877 |
8299 |
8333 |
+ |
(TTA)n |
Simple_repeat |
| scaffold9877 |
8898 |
8951 |
+ |
(TTTGGGCC)n |
Simple_repeat |
| scaffold9877 |
9002 |
9103 |
+ |
(A)n |
Simple_repeat |
| scaffold9877 |
9081 |
9103 |
+ |
(A)n |
Simple_repeat |
| scaffold9877 |
11359 |
11390 |
+ |
(T)n |
Simple_repeat |
| scaffold9877 |
11524 |
11562 |
+ |
A-rich |
Low_complexity |
| scaffold9877 |
11710 |
11735 |
+ |
(TGAA)n |
Simple_repeat |
| scaffold9877 |
11751 |
11890 |
+ |
RS718 |
Unspecified |
| scaffold9877 |
13494 |
13542 |
+ |
(ATTAA)n |
Simple_repeat |
| scaffold9877 |
13830 |
13867 |
+ |
(TAA)n |
Simple_repeat |
| scaffold9877 |
14025 |
14052 |
+ |
(AAG)n |
Simple_repeat |
| scaffold9877 |
14757 |
14847 |
+ |
RS16382 |
Unspecified |
| scaffold9877 |
15370 |
15419 |
+ |
(TAT)n |
Simple_repeat |
| scaffold9877 |
16166 |
16384 |
+ |
RS1485 |
Unspecified |
| scaffold9877 |
17205 |
17303 |
+ |
RS16888 |
Unspecified |
| scaffold9877 |
17282 |
17743 |
- |
PL734 |
Unspecified |
| scaffold9877 |
17295 |
17682 |
- |
PL753 |
Unspecified |
| scaffold9877 |
18140 |
18172 |
+ |
A-rich |
Low_complexity |
| scaffold9877 |
18199 |
18607 |
- |
RS4863 |
Unspecified |
| scaffold9877 |
18480 |
18624 |
+ |
PL753 |
Unspecified |
| scaffold9877 |
19133 |
19344 |
- |
RS96 |
Unspecified |
| scaffold9877 |
19341 |
19491 |
- |
RS1160 |
Unspecified |
| scaffold9877 |
19532 |
20887 |
- |
LINE |
LINE(TransposonPSI) |
| scaffold9877 |
19622 |
20798 |
- |
LINE1-66_SBi |
LINE/L1 |
| scaffold9877 |
20985 |
21232 |
+ |
(CAGTT)n |
Simple_repeat |
| scaffold9877 |
21340 |
21564 |
+ |
(CAGTT)n |
Simple_repeat |
| scaffold9877 |
21981 |
22075 |
+ |
RS1 |
Unspecified |
| scaffold9877 |
22243 |
22386 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold9877 |
22412 |
22505 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold9877 |
22623 |
22712 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold9877 |
22781 |
22855 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold9877 |
23182 |
23259 |
+ |
(CAGCT)n |
Simple_repeat |
| scaffold9877 |
25076 |
25139 |
- |
RS3355 |
Unspecified |
| scaffold9877 |
25149 |
25179 |
+ |
(T)n |
Simple_repeat |
| scaffold9877 |
25208 |
25474 |
+ |
PL3 |
Unspecified |
| scaffold9877 |
25471 |
25729 |
- |
RS41 |
Unspecified |
| scaffold9877 |
25731 |
25857 |
+ |
PL3 |
Unspecified |
| scaffold9877 |
26423 |
26837 |
+ |
RS458 |
Unspecified |
| scaffold9877 |
26837 |
26998 |
+ |
RS15463 |
Unspecified |
| scaffold9877 |
27177 |
27309 |
+ |
(AATT)n |
Simple_repeat |
| scaffold9877 |
27632 |
27693 |
+ |
(ATAACA)n |
Simple_repeat |
| scaffold9877 |
29177 |
29207 |
+ |
(CAAT)n |
Simple_repeat |
| scaffold9877 |
29481 |
29524 |
+ |
A-rich |
Low_complexity |
| scaffold9877 |
30411 |
30433 |
+ |
(A)n |
Simple_repeat |
| scaffold9877 |
30520 |
31032 |
- |
RS1368 |
Unspecified |
| scaffold9877 |
30733 |
30785 |
+ |
A-rich |
Low_complexity |
| scaffold9877 |
31116 |
31150 |
+ |
RS10 |
Unspecified |
| scaffold9877 |
31448 |
31527 |
+ |
(TAATTA)n |
Simple_repeat |
| scaffold9877 |
31623 |
31682 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold9877 |
32019 |
32135 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold9877 |
33381 |
33404 |
+ |
(ATG)n |
Simple_repeat |
| scaffold9877 |
33405 |
33470 |
+ |
(ATA)n |
Simple_repeat |
| scaffold9877 |
33776 |
33803 |
+ |
(TGTTT)n |
Simple_repeat |
| scaffold9877 |
34017 |
34258 |
+ |
RS4 |
Unspecified |
| scaffold9877 |
34493 |
34540 |
+ |
(TTAATAT)n |
Simple_repeat |
| scaffold9877 |
35317 |
35511 |
+ |
RS17793 |
Unspecified |
| scaffold9877 |
39815 |
40348 |
- |
RS367 |
Unspecified |
| scaffold9877 |
40480 |
40681 |
+ |
RS5758 |
Unspecified |
| scaffold9877 |
40692 |
40954 |
+ |
RS365 |
Unspecified |
| scaffold9877 |
41067 |
41331 |
- |
RS106 |
Unspecified |
| scaffold9877 |
41430 |
41555 |
- |
RS861 |
Unspecified |
| scaffold9877 |
41555 |
41829 |
- |
LTR2-ZM_LTR |
LTR |
| scaffold9877 |
41899 |
42287 |
+ |
RS1100 |
Unspecified |
| scaffold9877 |
42733 |
43476 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold9877 |
43883 |
45034 |
+ |
Copia-32-I_VV |
LTR/Copia |
| scaffold9877 |
45319 |
46986 |
+ |
Copia-32-I_VV |
LTR/Copia |
| scaffold9877 |
47486 |
47645 |
+ |
RS1089 |
Unspecified |
| scaffold9877 |
47807 |
48079 |
+ |
RS1649 |
Unspecified |
| scaffold9877 |
48079 |
48329 |
- |
RS594 |
Unspecified |
| scaffold9877 |
48358 |
48394 |
+ |
(TCTTCAA)n |
Simple_repeat |
| scaffold9877 |
49259 |
49295 |
+ |
(TGAAGAT)n |
Simple_repeat |
| scaffold9877 |
49324 |
49369 |
+ |
(ATATT)n |
Simple_repeat |
| scaffold9877 |
49573 |
49630 |
+ |
RS1649 |
Unspecified |
| scaffold9877 |
51220 |
51243 |
+ |
(T)n |
Simple_repeat |
| scaffold9877 |
53233 |
53260 |
+ |
(T)n |
Simple_repeat |
| scaffold9877 |
53695 |
53721 |
+ |
(AAAT)n |
Simple_repeat |
| scaffold9877 |
54084 |
54129 |
+ |
A-rich |
Low_complexity |
| scaffold9877 |
54338 |
54369 |
+ |
(TGTA)n |
Simple_repeat |
| scaffold9877 |
55545 |
55568 |
+ |
(A)n |
Simple_repeat |
| scaffold9877 |
55667 |
55710 |
+ |
(AATATA)n |
Simple_repeat |
| scaffold9877 |
55880 |
55909 |
+ |
(AATA)n |
Simple_repeat |
| scaffold9877 |
56557 |
56710 |
+ |
RS13235 |
Unspecified |
| scaffold9877 |
57092 |
57318 |
- |
ATCopia34_LTR |
LTR/Copia |
| scaffold9877 |
57483 |
57635 |
+ |
RS13235 |
Unspecified |
| scaffold9877 |
57825 |
57880 |
+ |
(ATA)n |
Simple_repeat |
| scaffold9877 |
58079 |
58108 |
+ |
(TTATT)n |
Simple_repeat |
| scaffold9877 |
58516 |
58906 |
- |
RS29 |
Unspecified |
| scaffold9877 |
59662 |
59979 |
- |
RS2862 |
Unspecified |
| scaffold9877 |
59869 |
61063 |
- |
RS408 |
Unspecified |
| scaffold9877 |
61703 |
61849 |
- |
cacta |
cacta(TransposonPSI) |
| scaffold9877 |
61731 |
61845 |
- |
EnSpm-2_STu |
DNA/CMC-EnSpm |
| scaffold9877 |
61946 |
62321 |
+ |
RS1689 |
Unspecified |
| scaffold9877 |
62388 |
62436 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold9877 |
62809 |
62977 |
- |
RS2694 |
Unspecified |
| scaffold9877 |
63081 |
63150 |
+ |
(ATTA)n |
Simple_repeat |
| scaffold9877 |
63625 |
63734 |
- |
EnSpm-2_STu |
DNA/CMC-EnSpm |
| scaffold9877 |
63757 |
64084 |
+ |
EnSpm-2_STu |
DNA/CMC-EnSpm |
| scaffold9877 |
64894 |
64979 |
+ |
(CAGCT)n |
Simple_repeat |
| scaffold9877 |
65028 |
65172 |
+ |
RS1500 |
Unspecified |
| scaffold9877 |
65049 |
65250 |
- |
RS6318 |
Unspecified |
| scaffold9877 |
65330 |
65451 |
+ |
RS17105 |
Unspecified |
| scaffold9877 |
65452 |
65497 |
+ |
RS476 |
Unspecified |
| scaffold9877 |
65522 |
65571 |
+ |
(CCGGC)n |
Simple_repeat |
| scaffold9877 |
66243 |
66317 |
- |
RS5996 |
Unspecified |
| scaffold9877 |
66449 |
66544 |
+ |
(CCGGC)n |
Simple_repeat |
| scaffold9877 |
66525 |
66563 |
+ |
(ACCAGG)n |
Simple_repeat |
| scaffold9877 |
66568 |
66589 |
+ |
(AAT)n |
Simple_repeat |
| scaffold9877 |
66818 |
66861 |
+ |
(TAGTGAG)n |
Simple_repeat |
| scaffold9877 |
66969 |
67022 |
+ |
(TCA)n |
Simple_repeat |
| scaffold9877 |
67607 |
67668 |
+ |
(GTTGTG)n |
Simple_repeat |
| scaffold9877 |
71314 |
71525 |
- |
RS1669 |
Unspecified |
| scaffold9877 |
72759 |
72775 |
+ |
(T)n |
Simple_repeat |
| scaffold9877 |
76087 |
76266 |
- |
RS38 |
Unspecified |
| scaffold9877 |
79347 |
79398 |
+ |
A-rich |
Low_complexity |
| scaffold9877 |
79530 |
79569 |
+ |
(TGG)n |
Simple_repeat |
| scaffold9877 |
79570 |
79644 |
+ |
(GTTGTT)n |
Simple_repeat |
| scaffold9877 |
79909 |
80054 |
+ |
RS38 |
Unspecified |
| scaffold9877 |
80244 |
80374 |
- |
hAT-17N1_ZM |
DNA/hAT-Ac |
| scaffold9877 |
80785 |
81439 |
+ |
(ATGTATAT)n |
Simple_repeat |
| scaffold9877 |
81399 |
81439 |
+ |
(ATGTATAT)n |
Simple_repeat |
| scaffold9877 |
81558 |
81680 |
+ |
(GGATATC)n |
Simple_repeat |
| scaffold9877 |
82060 |
82088 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold9877 |
82128 |
82215 |
+ |
A-rich |
Low_complexity |
| scaffold9877 |
84587 |
84691 |
+ |
RS11810 |
Unspecified |
| scaffold9877 |
84717 |
85127 |
+ |
RS263 |
Unspecified |
| scaffold9877 |
89166 |
89421 |
- |
RS1 |
Unspecified |
| scaffold9877 |
89391 |
89426 |
+ |
RS1 |
Unspecified |
| scaffold9877 |
90472 |
90495 |
+ |
(T)n |
Simple_repeat |
| scaffold9877 |
91537 |
91576 |
+ |
(GTTGTTTC)n |
Simple_repeat |
| scaffold9877 |
92238 |
92284 |
+ |
(TTATT)n |
Simple_repeat |
| scaffold9877 |
92880 |
93000 |
+ |
RS15192 |
Unspecified |
| scaffold9877 |
93305 |
93655 |
+ |
RS704 |
Unspecified |
| scaffold9877 |
93646 |
94537 |
+ |
RS16696 |
Unspecified |
| scaffold9877 |
94790 |
94819 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold9877 |
95313 |
95350 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold9877 |
95812 |
95932 |
+ |
RS15192 |
Unspecified |
| scaffold9877 |
96237 |
96584 |
+ |
RS704 |
Unspecified |
| scaffold9877 |
96919 |
97810 |
+ |
RS16696 |
Unspecified |
| scaffold9877 |
98063 |
98092 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold9877 |
101823 |
101853 |
+ |
(ATTTT)n |
Simple_repeat |
| scaffold9877 |
102192 |
102213 |
+ |
(ACGG)n |
Simple_repeat |
| scaffold9877 |
102351 |
102367 |
+ |
(T)n |
Simple_repeat |
| scaffold9877 |
103289 |
103541 |
- |
RS13542 |
Unspecified |
| scaffold9877 |
103563 |
103632 |
+ |
A-rich |
Low_complexity |
| scaffold9877 |
103993 |
104078 |
- |
PIF12_ZM |
DNA/PIF-Harbinger |
| scaffold9877 |
104336 |
104385 |
+ |
(TTTCAA)n |
Simple_repeat |
| scaffold9877 |
104636 |
104673 |
+ |
(T)n |
Simple_repeat |
| scaffold9877 |
105793 |
105864 |
+ |
(T)n |
Simple_repeat |
| scaffold9877 |
113153 |
113175 |
+ |
(A)n |
Simple_repeat |
| scaffold9877 |
113420 |
113441 |
+ |
(ATGG)n |
Simple_repeat |
| scaffold9877 |
117720 |
117748 |
+ |
(ATTT)n |
Simple_repeat |
| scaffold9877 |
118646 |
118664 |
+ |
(A)n |
Simple_repeat |
| scaffold9877 |
118905 |
118946 |
+ |
PL539 |
Unspecified |
| scaffold9877 |
118930 |
118973 |
- |
PL1 |
Unspecified |
| scaffold9877 |
118930 |
118967 |
+ |
PL886 |
Unspecified |
| scaffold9877 |
120126 |
120203 |
+ |
(T)n |
Simple_repeat |
| scaffold9877 |
120302 |
120376 |
+ |
(TTTTTGG)n |
Simple_repeat |
| scaffold9877 |
124031 |
124116 |
+ |
PIF12_ZM |
DNA/PIF-Harbinger |
| scaffold9877 |
124194 |
124217 |
+ |
(TTGA)n |
Simple_repeat |
| scaffold9877 |
124218 |
124248 |
+ |
(TTTGAT)n |
Simple_repeat |
| scaffold9877 |
124636 |
124702 |
+ |
(AAT)n |
Simple_repeat |
| scaffold9877 |
124703 |
124728 |
+ |
(AATAAC)n |
Simple_repeat |
| scaffold9877 |
125210 |
125571 |
+ |
RS8 |
Unspecified |
| scaffold9877 |
126791 |
126858 |
+ |
(ATT)n |
Simple_repeat |
| scaffold9877 |
126875 |
126905 |
+ |
(TTATA)n |
Simple_repeat |
| scaffold9877 |
127881 |
127953 |
+ |
(A)n |
Simple_repeat |
| scaffold9877 |
128373 |
128637 |
- |
RS106 |
Unspecified |
| scaffold9877 |
128765 |
128788 |
+ |
(A)n |
Simple_repeat |
| scaffold9877 |
128765 |
129027 |
+ |
(A)n |
Simple_repeat |
| scaffold9877 |
128784 |
129027 |
+ |
RS15702 |
Unspecified |
| scaffold9877 |
129030 |
129054 |
+ |
(CGA)n |
Simple_repeat |
| scaffold9877 |
129210 |
129409 |
+ |
RS1829 |
Unspecified |
| scaffold9877 |
130030 |
130087 |
+ |
(TCCCC)n |
Simple_repeat |
| scaffold9877 |
130146 |
130261 |
+ |
RS15856 |
Unspecified |
| scaffold9877 |
130572 |
130681 |
+ |
RS15856 |
Unspecified |
| scaffold9877 |
130837 |
130864 |
+ |
A-rich |
Low_complexity |
| scaffold9877 |
131317 |
131425 |
+ |
RS15754 |
Unspecified |
| scaffold9877 |
131669 |
131852 |
- |
RS1796 |
Unspecified |
| scaffold9877 |
132555 |
132590 |
+ |
(ATCTTC)n |
Simple_repeat |
| scaffold9877 |
132695 |
132811 |
- |
RS702 |
Unspecified |
| scaffold9877 |
133286 |
133328 |
+ |
A-rich |
Low_complexity |
| scaffold9877 |
133817 |
133865 |
+ |
(AATAA)n |
Simple_repeat |
| scaffold9877 |
135132 |
135421 |
+ |
RS454 |
Unspecified |
| scaffold9877 |
137201 |
137481 |
+ |
RS17600 |
Unspecified |
| scaffold9877 |
137547 |
137571 |
+ |
(A)n |
Simple_repeat |
| scaffold9877 |
138027 |
138056 |
+ |
A-rich |
Low_complexity |
| scaffold9877 |
139210 |
139333 |
- |
RS170 |
Unspecified |
| scaffold9877 |
139439 |
139583 |
+ |
RS7816 |
Unspecified |
| scaffold9877 |
140126 |
140268 |
+ |
TRAMET1 |
DNA/TcMar-Stowaway |
| scaffold9877 |
141111 |
141228 |
- |
RS12449 |
Unspecified |
| scaffold9877 |
141125 |
141229 |
- |
PL754 |
Unspecified |
| scaffold9877 |
141233 |
141261 |
+ |
(TCATA)n |
Simple_repeat |
| scaffold9877 |
142218 |
142769 |
+ |
RS1230 |
Unspecified |
| scaffold9877 |
143149 |
143184 |
+ |
A-rich |
Low_complexity |
| scaffold9877 |
143985 |
144027 |
+ |
A-rich |
Low_complexity |
| scaffold9877 |
145403 |
145459 |
+ |
A-rich |
Low_complexity |
| scaffold9877 |
145468 |
145505 |
+ |
(CATTT)n |
Simple_repeat |
| scaffold9877 |
145874 |
145898 |
+ |
(TTGA)n |
Simple_repeat |
| scaffold9877 |
146017 |
146071 |
+ |
(TTTTATT)n |
Simple_repeat |
| scaffold9877 |
147176 |
147207 |
+ |
(TTTAA)n |
Simple_repeat |
| scaffold9877 |
147631 |
147652 |
+ |
(A)n |
Simple_repeat |
| scaffold9877 |
148319 |
148348 |
+ |
(T)n |
Simple_repeat |
| scaffold9877 |
148531 |
148652 |
- |
RS16333 |
Unspecified |
| scaffold9877 |
149419 |
149437 |
+ |
(T)n |
Simple_repeat |
| scaffold9877 |
149471 |
149516 |
+ |
(TAA)n |
Simple_repeat |
| scaffold9877 |
150962 |
150991 |
+ |
(TA)n |
Simple_repeat |
| scaffold9877 |
155119 |
155152 |
+ |
A-rich |
Low_complexity |
| scaffold9877 |
155897 |
155913 |
+ |
(A)n |
Simple_repeat |
| scaffold9877 |
156022 |
156045 |
+ |
(GAA)n |
Simple_repeat |
| scaffold9877 |
156951 |
156988 |
+ |
(TCAG)n |
Simple_repeat |
| scaffold9877 |
157090 |
157542 |
+ |
RS2791 |
Unspecified |
| scaffold9877 |
157545 |
158024 |
+ |
PL838 |
Unspecified |
| scaffold9877 |
158242 |
158523 |
- |
RS354 |
Unspecified |
| scaffold9877 |
158280 |
158445 |
+ |
RS3868 |
Unspecified |
| scaffold9877 |
161706 |
161818 |
- |
Copia-3_PTri-I |
LTR/Copia |
| scaffold9877 |
162385 |
162496 |
+ |
PL370 |
Unspecified |
| scaffold9877 |
162399 |
162770 |
+ |
PL438 |
Unspecified |
| scaffold9877 |
162709 |
162825 |
- |
RS5915 |
Unspecified |
| scaffold9877 |
163081 |
163388 |
- |
RS7727 |
Unspecified |
| scaffold9877 |
163617 |
163779 |
- |
RS16316 |
Unspecified |
| scaffold9877 |
164000 |
164019 |
+ |
(A)n |
Simple_repeat |
| scaffold9877 |
164195 |
164247 |
+ |
(TTTTAA)n |
Simple_repeat |
| scaffold9877 |
165072 |
166012 |
+ |
A-rich |
Low_complexity |
| scaffold9877 |
167364 |
167487 |
- |
RS17943 |
Unspecified |
| scaffold9877 |
172926 |
172971 |
+ |
(ATACAT)n |
Simple_repeat |
| scaffold9877 |
174250 |
174268 |
+ |
(AT)n |
Simple_repeat |
| scaffold9877 |
174344 |
174378 |
+ |
(AATAA)n |
Simple_repeat |
| scaffold9877 |
174379 |
174404 |
+ |
(A)n |
Simple_repeat |
| scaffold9877 |
174517 |
174555 |
+ |
A-rich |
Low_complexity |
| scaffold9877 |
174688 |
174730 |
+ |
A-rich |
Low_complexity |
| scaffold9877 |
175004 |
175031 |
+ |
A-rich |
Low_complexity |
| scaffold9877 |
175437 |
175469 |
+ |
(AATTAA)n |
Simple_repeat |
| scaffold9877 |
175521 |
175809 |
- |
RS513 |
Unspecified |
| scaffold9877 |
176069 |
176136 |
+ |
(TTA)n |
Simple_repeat |
| scaffold9877 |
176420 |
176466 |
+ |
(TATTTTC)n |
Simple_repeat |
| scaffold9877 |
176493 |
176742 |
- |
RS677 |
Unspecified |
| scaffold9877 |
176796 |
176862 |
+ |
(TATTATT)n |
Simple_repeat |
| scaffold9877 |
176973 |
177002 |
+ |
A-rich |
Low_complexity |
| scaffold9877 |
177055 |
177112 |
+ |
(TATTT)n |
Simple_repeat |
| scaffold9877 |
177213 |
177357 |
+ |
RS3161 |
Unspecified |
| scaffold9877 |
177372 |
177420 |
+ |
(TAA)n |
Simple_repeat |
| scaffold9877 |
177742 |
177785 |
+ |
A-rich |
Low_complexity |
| scaffold9877 |
177898 |
178094 |
+ |
(TAA)n |
Simple_repeat |
| scaffold9877 |
177898 |
177948 |
+ |
(TAA)n |
Simple_repeat |
| scaffold9877 |
177942 |
178094 |
+ |
RS16386 |
Unspecified |
| scaffold9877 |
178665 |
178824 |
+ |
RS6939 |
Unspecified |
| scaffold9877 |
179359 |
179414 |
+ |
(TGG)n |
Simple_repeat |
| scaffold9877 |
180512 |
180729 |
- |
RS11189 |
Unspecified |
| scaffold9877 |
182696 |
182772 |
- |
Copia-1_ST-LTR |
LTR/Copia |
| scaffold9877 |
182815 |
182909 |
+ |
RS13324 |
Unspecified |
| scaffold9877 |
183671 |
183796 |
+ |
EnSpm-7_STu |
DNA/CMC-EnSpm |
| scaffold9877 |
183929 |
184055 |
- |
Copia-1_ST-LTR |
LTR/Copia |
| scaffold9877 |
184146 |
184260 |
- |
Copia-1_ST-LTR |
LTR/Copia |
| scaffold9877 |
185319 |
185345 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold9877 |
185718 |
185734 |
+ |
(A)n |
Simple_repeat |
| scaffold9877 |
186367 |
186545 |
- |
RS5 |
Unspecified |
| scaffold9877 |
187442 |
187474 |
+ |
(CTCCTG)n |
Simple_repeat |
| scaffold9877 |
189566 |
189669 |
+ |
RS15539 |
Unspecified |
| scaffold9877 |
195312 |
195333 |
+ |
(AATA)n |
Simple_repeat |
| scaffold9877 |
195527 |
195567 |
+ |
A-rich |
Low_complexity |
| scaffold9877 |
195612 |
195635 |
+ |
(T)n |
Simple_repeat |
| scaffold9877 |
195926 |
196062 |
+ |
RS15204 |
Unspecified |
| scaffold9877 |
196094 |
196331 |
+ |
RS15880 |
Unspecified |
| scaffold9877 |
197631 |
197652 |
+ |
(AATA)n |
Simple_repeat |
| scaffold9877 |
197846 |
197886 |
+ |
A-rich |
Low_complexity |
| scaffold9877 |
197931 |
197954 |
+ |
(T)n |
Simple_repeat |
| scaffold9877 |
198245 |
198381 |
+ |
RS15204 |
Unspecified |
| scaffold9877 |
198413 |
198650 |
+ |
RS15880 |
Unspecified |
| scaffold9877 |
199549 |
199566 |
+ |
(A)n |
Simple_repeat |
| scaffold9877 |
199595 |
199621 |
+ |
(TAAAA)n |
Simple_repeat |
| scaffold9877 |
199875 |
199904 |
+ |
(T)n |
Simple_repeat |
| scaffold9877 |
201539 |
201673 |
+ |
RS13055 |
Unspecified |
| scaffold9877 |
201783 |
201819 |
+ |
A-rich |
Low_complexity |
| scaffold9877 |
202660 |
202690 |
+ |
(TTA)n |
Simple_repeat |
| scaffold9877 |
202988 |
203008 |
+ |
(A)n |
Simple_repeat |
| scaffold9877 |
203090 |
203249 |
+ |
RS10084 |
Unspecified |
| scaffold9877 |
203276 |
203410 |
+ |
RS13055 |
Unspecified |
| scaffold9877 |
203474 |
203731 |
+ |
RS47 |
Unspecified |
| scaffold9877 |
204627 |
204654 |
+ |
(TTA)n |
Simple_repeat |
| scaffold9877 |
205040 |
205199 |
+ |
RS10084 |
Unspecified |
| scaffold9877 |
205347 |
205376 |
+ |
(GAT)n |
Simple_repeat |
| scaffold9877 |
205584 |
206038 |
- |
PL2 |
Unspecified |
| scaffold9877 |
206402 |
206499 |
+ |
RS882 |
Unspecified |
| scaffold9877 |
208036 |
208217 |
- |
RS275 |
Unspecified |
| scaffold9877 |
208454 |
208479 |
+ |
(T)n |
Simple_repeat |
| scaffold9877 |
208726 |
209003 |
+ |
PL762 |
Unspecified |
| scaffold9877 |
209784 |
209815 |
+ |
(TAA)n |
Simple_repeat |
| scaffold9877 |
209848 |
210131 |
- |
RS160 |
Unspecified |
| scaffold9877 |
210610 |
211081 |
- |
PL530 |
Unspecified |
| scaffold9877 |
211732 |
211783 |
- |
Copia-10_BD-I |
LTR/Copia |
| scaffold9877 |
212416 |
212580 |
- |
Copia-10_BD-I |
LTR/Copia |
| scaffold9877 |
212584 |
212699 |
- |
Copia-10_BD-I |
LTR/Copia |
| scaffold9877 |
212675 |
213468 |
- |
Copia-10_BD-I |
LTR/Copia |
| scaffold9877 |
213668 |
213777 |
- |
Copia25-PTR_I-int |
LTR/Copia |
| scaffold9877 |
213771 |
214099 |
- |
Copia25-PTR_I-int |
LTR/Copia |
| scaffold9877 |
214236 |
215030 |
- |
Copia25-PTR_I-int |
LTR/Copia |
| scaffold9877 |
215141 |
216023 |
- |
Copia25-PTR_I-int |
LTR/Copia |
| scaffold9877 |
215141 |
215796 |
- |
Copia25-PTR_I-int |
LTR/Copia |
| scaffold9877 |
215727 |
216023 |
- |
RS4087 |
Unspecified |
| scaffold9877 |
218180 |
218930 |
+ |
PL475 |
Unspecified |
| scaffold9877 |
218995 |
219011 |
+ |
(T)n |
Simple_repeat |
| scaffold9877 |
219061 |
219838 |
- |
PL530 |
Unspecified |
| scaffold9877 |
220866 |
221020 |
- |
RS1460 |
Unspecified |
| scaffold9877 |
221230 |
221524 |
- |
RS1347 |
Unspecified |
| scaffold9877 |
221578 |
221623 |
+ |
ATRAN |
DNA? |
| scaffold9877 |
222581 |
222875 |
- |
RS1347 |
Unspecified |
| scaffold9877 |
222929 |
222974 |
+ |
ATRAN |
DNA? |
| scaffold9877 |
223725 |
223943 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold9877 |
224317 |
224538 |
- |
Copia-3_PTri-I |
LTR/Copia |
| scaffold9877 |
225153 |
225171 |
+ |
(T)n |
Simple_repeat |
| scaffold9877 |
226471 |
226651 |
+ |
RS3577 |
Unspecified |
| scaffold9877 |
227763 |
227826 |
+ |
(TTCCC)n |
Simple_repeat |
| scaffold9877 |
228050 |
228101 |
+ |
(TTTCC)n |
Simple_repeat |
| scaffold9877 |
228204 |
228302 |
+ |
RS603 |
Unspecified |
| scaffold9877 |
230248 |
230381 |
+ |
RS2105 |
Unspecified |
| scaffold9877 |
231995 |
232027 |
+ |
(TTATTT)n |
Simple_repeat |
| scaffold9877 |
232558 |
232633 |
+ |
(TTTAG)n |
Simple_repeat |
| scaffold9877 |
233236 |
233289 |
+ |
EnSpm-3_TA |
DNA/CMC-EnSpm |
| scaffold9877 |
233458 |
233583 |
+ |
ATRAN |
DNA? |
| scaffold9877 |
233870 |
233910 |
+ |
ATRAN |
DNA? |
| scaffold9877 |
233981 |
234205 |
+ |
PL727 |
Unspecified |
| scaffold9877 |
234493 |
234622 |
+ |
RS17293 |
Unspecified |
| scaffold9877 |
235352 |
235376 |
+ |
(A)n |
Simple_repeat |
| scaffold9877 |
235435 |
235493 |
+ |
(ATA)n |
Simple_repeat |
| scaffold9877 |
235525 |
235710 |
+ |
RS38 |
Unspecified |
| scaffold9877 |
235878 |
236067 |
+ |
RS17547 |
Unspecified |
| scaffold9877 |
236240 |
236284 |
+ |
(TATAAT)n |
Simple_repeat |
| scaffold9877 |
236493 |
236538 |
+ |
(CATAT)n |
Simple_repeat |
| scaffold9877 |
237203 |
237240 |
+ |
(T)n |
Simple_repeat |
| scaffold9877 |
237444 |
237463 |
+ |
(A)n |
Simple_repeat |
| scaffold9877 |
237599 |
237660 |
+ |
(ATT)n |
Simple_repeat |
| scaffold9877 |
237661 |
237697 |
+ |
A-rich |
Low_complexity |
| scaffold9877 |
237801 |
237902 |
+ |
RS16382 |
Unspecified |
| scaffold9877 |
237946 |
238006 |
- |
HAT-14_Mad |
DNA/hAT-Tip100 |
| scaffold9877 |
238310 |
238491 |
+ |
RS79 |
Unspecified |
| scaffold9877 |
238492 |
238606 |
+ |
RS9257 |
Unspecified |
| scaffold9877 |
239271 |
239322 |
+ |
A-rich |
Low_complexity |
| scaffold9877 |
239377 |
239429 |
+ |
(AAC)n |
Simple_repeat |
| scaffold9877 |
239961 |
240002 |
+ |
(AAT)n |
Simple_repeat |
| scaffold9877 |
240253 |
240311 |
+ |
(AAT)n |
Simple_repeat |
| scaffold9877 |
241487 |
241512 |
+ |
(AATAA)n |
Simple_repeat |
| scaffold9877 |
242060 |
242094 |
+ |
(A)n |
Simple_repeat |
| scaffold9877 |
242373 |
242414 |
+ |
(ACC)n |
Simple_repeat |
| scaffold9877 |
242579 |
242645 |
+ |
(TAA)n |
Simple_repeat |
| scaffold9877 |
242790 |
242840 |
+ |
A-rich |
Low_complexity |
| scaffold9877 |
243299 |
243357 |
+ |
A-rich |
Low_complexity |
| scaffold9877 |
244285 |
244525 |
+ |
RS138 |
Unspecified |
| scaffold9877 |
244529 |
244555 |
+ |
(AT)n |
Simple_repeat |
| scaffold9877 |
244660 |
244685 |
+ |
(A)n |
Simple_repeat |
| scaffold9877 |
244733 |
244760 |
+ |
(T)n |
Simple_repeat |
| scaffold9877 |
244761 |
244795 |
+ |
(CTT)n |
Simple_repeat |
| scaffold9877 |
245573 |
245844 |
- |
RS7080 |
Unspecified |
| scaffold9877 |
246154 |
246232 |
+ |
MuDR3_ZM |
DNA/MULE-MuDR |
| scaffold9877 |
246238 |
246758 |
+ |
RS587 |
Unspecified |
| scaffold9877 |
246744 |
246812 |
+ |
RS587 |
Unspecified |
| scaffold9877 |
246915 |
246994 |
+ |
RS3434 |
Unspecified |
| scaffold9877 |
246939 |
247169 |
+ |
RS2304 |
Unspecified |
| scaffold9877 |
247446 |
247565 |
+ |
RS6972 |
Unspecified |
| scaffold9877 |
248226 |
248267 |
+ |
(AATTTTT)n |
Simple_repeat |
| scaffold9877 |
248378 |
248425 |
+ |
(TA)n |
Simple_repeat |
| scaffold9877 |
248657 |
248673 |
+ |
(AT)n |
Simple_repeat |
| scaffold9877 |
248880 |
249387 |
- |
PL544 |
Unspecified |
| scaffold9877 |
249429 |
249468 |
+ |
(ATAATTA)n |
Simple_repeat |
| scaffold9877 |
249944 |
250117 |
+ |
RS17860 |
Unspecified |
| scaffold9877 |
250420 |
250437 |
+ |
(A)n |
Simple_repeat |
| scaffold9877 |
250420 |
250860 |
+ |
(A)n |
Simple_repeat |
| scaffold9877 |
250429 |
250860 |
+ |
RS283 |
Unspecified |
| scaffold9877 |
250890 |
250932 |
+ |
(A)n |
Simple_repeat |
| scaffold9877 |
251183 |
251544 |
+ |
RS8 |
Unspecified |
| scaffold9877 |
251252 |
251587 |
- |
RS311 |
Unspecified |
| scaffold9877 |
251936 |
252079 |
- |
RS115 |
Unspecified |
| scaffold9877 |
252182 |
252501 |
- |
RS160 |
Unspecified |
| scaffold9877 |
252853 |
252885 |
+ |
(ATAATG)n |
Simple_repeat |
| scaffold9877 |
253315 |
253800 |
+ |
PL261 |
Unspecified |
| scaffold9877 |
255447 |
255504 |
- |
STOWAWAY2_SB |
DNA/TcMar-Stowaway |
| scaffold9877 |
256678 |
256747 |
+ |
(TTCAAT)n |
Simple_repeat |
| scaffold9877 |
256765 |
257031 |
+ |
RS17600 |
Unspecified |
| scaffold9877 |
257108 |
257208 |
+ |
(ATTATTG)n |
Simple_repeat |
| scaffold9877 |
257486 |
257574 |
+ |
(TTTATG)n |
Simple_repeat |
| scaffold9877 |
258114 |
258139 |
+ |
(A)n |
Simple_repeat |
| scaffold9877 |
258599 |
258633 |
+ |
RS135 |
Unspecified |
| scaffold9877 |
260078 |
260135 |
- |
STOWAWAY2_SB |
DNA/TcMar-Stowaway |
| scaffold9877 |
261309 |
261378 |
+ |
(TTCAAT)n |
Simple_repeat |
| scaffold9877 |
261396 |
261662 |
+ |
RS17600 |
Unspecified |
| scaffold9877 |
261739 |
261839 |
+ |
(ATTATTG)n |
Simple_repeat |
| scaffold9877 |
262029 |
262117 |
+ |
(TTTATG)n |
Simple_repeat |
| scaffold9877 |
262657 |
262681 |
+ |
(A)n |
Simple_repeat |
| scaffold9877 |
263142 |
263275 |
+ |
RS135 |
Unspecified |
| scaffold9877 |
263629 |
263702 |
+ |
RS143 |
Unspecified |
| scaffold9877 |
263884 |
263918 |
+ |
(GATTT)n |
Simple_repeat |
| scaffold9877 |
264509 |
265495 |
+ |
RIRE1_I-int |
LTR/Copia |
| scaffold9877 |
265300 |
265495 |
+ |
RIRE1_I-int |
LTR/Copia |
| scaffold9877 |
265531 |
266107 |
- |
RS423 |
Unspecified |
| scaffold9877 |
266110 |
266751 |
+ |
RIRE1_I-int |
LTR/Copia |
| scaffold9877 |
266556 |
266751 |
+ |
RIRE1_I-int |
LTR/Copia |
| scaffold9877 |
267450 |
268026 |
- |
RS423 |
Unspecified |
| scaffold9877 |
268028 |
269128 |
- |
RS423 |
Unspecified |
| scaffold9877 |
270087 |
270681 |
+ |
RIRE1_LTR |
LTR/Copia |
| scaffold9877 |
271072 |
271098 |
+ |
(ATTCA)n |
Simple_repeat |
| scaffold9877 |
271234 |
271322 |
+ |
(TTATTC)n |
Simple_repeat |
| scaffold9877 |
272541 |
272801 |
+ |
MuDR_A_B |
MuDR_A_B(TransposonPSI) |
| scaffold9877 |
272566 |
272791 |
+ |
MUMT |
DNA/MULE-MuDR |
| scaffold9877 |
273105 |
273320 |
- |
RS357 |
Unspecified |
| scaffold9877 |
273346 |
273607 |
+ |
RS481 |
Unspecified |
| scaffold9877 |
273701 |
274721 |
- |
PL678 |
Unspecified |
| scaffold9877 |
274752 |
275110 |
+ |
RS2913 |
Unspecified |
| scaffold9877 |
275733 |
276104 |
- |
RS616 |
Unspecified |
| scaffold9877 |
275927 |
276468 |
+ |
PL880 |
Unspecified |