scaffold9989 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold9989 |
55 |
111 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold9989 |
461 |
2144 |
- |
Copia-32-I_VV |
LTR/Copia |
| scaffold9989 |
2316 |
2777 |
- |
Copia-32-I_VV |
LTR/Copia |
| scaffold9989 |
2769 |
3103 |
- |
RS1334 |
Unspecified |
| scaffold9989 |
3137 |
3671 |
- |
RS554 |
Unspecified |
| scaffold9989 |
3398 |
3791 |
- |
RS1685 |
Unspecified |
| scaffold9989 |
3792 |
4694 |
- |
RS1685 |
Unspecified |
| scaffold9989 |
4455 |
4737 |
- |
RS7583 |
Unspecified |
| scaffold9989 |
4831 |
5567 |
- |
RS3001 |
Unspecified |
| scaffold9989 |
5568 |
6133 |
- |
RS554 |
Unspecified |
| scaffold9989 |
6249 |
6332 |
+ |
(ATTT)n |
Simple_repeat |
| scaffold9989 |
6742 |
6798 |
+ |
(ATTT)n |
Simple_repeat |
| scaffold9989 |
7312 |
7426 |
+ |
(CTGAA)n |
Simple_repeat |
| scaffold9989 |
7457 |
7528 |
+ |
(TAT)n |
Simple_repeat |
| scaffold9989 |
8671 |
8762 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold9989 |
9297 |
9492 |
- |
RS604 |
Unspecified |
| scaffold9989 |
9370 |
9469 |
- |
PL846 |
Unspecified |
| scaffold9989 |
12522 |
12558 |
+ |
(T)n |
Simple_repeat |
| scaffold9989 |
12741 |
13309 |
- |
RS508 |
Unspecified |
| scaffold9989 |
13368 |
13668 |
- |
RS90 |
Unspecified |
| scaffold9989 |
13492 |
13744 |
+ |
RS2985 |
Unspecified |
| scaffold9989 |
14006 |
15199 |
- |
Atlantys1_I-int |
LTR/Gypsy |
| scaffold9989 |
15673 |
16630 |
- |
Atlantys1_I-int |
LTR/Gypsy |
| scaffold9989 |
18408 |
18536 |
- |
RS90 |
Unspecified |
| scaffold9989 |
19435 |
19463 |
+ |
A-rich |
Low_complexity |
| scaffold9989 |
19758 |
20009 |
- |
RS5884 |
Unspecified |
| scaffold9989 |
20362 |
20613 |
- |
RS237 |
Unspecified |
| scaffold9989 |
20605 |
20973 |
- |
PL330 |
Unspecified |
| scaffold9989 |
20947 |
20989 |
- |
PL330 |
Unspecified |
| scaffold9989 |
21416 |
21437 |
+ |
(G)n |
Simple_repeat |
| scaffold9989 |
23365 |
23399 |
+ |
(TTA)n |
Simple_repeat |
| scaffold9989 |
23532 |
23652 |
+ |
(TTA)n |
Simple_repeat |
| scaffold9989 |
23654 |
23693 |
+ |
(ATTGTA)n |
Simple_repeat |
| scaffold9989 |
23957 |
23999 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold9989 |
24000 |
24152 |
+ |
(ATT)n |
Simple_repeat |
| scaffold9989 |
24153 |
24169 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold9989 |
24174 |
24239 |
+ |
(TCTGAAGTTT)n |
Simple_repeat |
| scaffold9989 |
25000 |
25221 |
- |
RS183 |
Unspecified |
| scaffold9989 |
26323 |
26395 |
+ |
RS550 |
Unspecified |
| scaffold9989 |
26394 |
27063 |
- |
RS695 |
Unspecified |
| scaffold9989 |
26396 |
26992 |
+ |
PL60 |
Unspecified |
| scaffold9989 |
31695 |
32445 |
- |
RS695 |
Unspecified |
| scaffold9989 |
31777 |
32374 |
+ |
PL60 |
Unspecified |
| scaffold9989 |
32416 |
33041 |
- |
RS1210 |
Unspecified |
| scaffold9989 |
33613 |
33870 |
+ |
RS2378 |
Unspecified |
| scaffold9989 |
33661 |
34594 |
+ |
(TTA)n |
Simple_repeat |
| scaffold9989 |
34426 |
34594 |
+ |
(TTA)n |
Simple_repeat |
| scaffold9989 |
34579 |
35128 |
+ |
RS1204 |
Unspecified |
| scaffold9989 |
36311 |
36419 |
+ |
RS693 |
Unspecified |
| scaffold9989 |
37014 |
38172 |
- |
RS655 |
Unspecified |
| scaffold9989 |
38235 |
38264 |
+ |
(TGTTTCG)n |
Simple_repeat |
| scaffold9989 |
39151 |
39228 |
+ |
(CTTGTG)n |
Simple_repeat |
| scaffold9989 |
40289 |
40444 |
+ |
(TGTGTT)n |
Simple_repeat |
| scaffold9989 |
40536 |
40765 |
- |
RS1025 |
Unspecified |
| scaffold9989 |
40647 |
41837 |
- |
RS1025 |
Unspecified |
| scaffold9989 |
42454 |
42509 |
+ |
(AAAAAG)n |
Simple_repeat |
| scaffold9989 |
43079 |
43123 |
+ |
WHAM2_TM-int |
LTR/Gypsy |
| scaffold9989 |
43448 |
43486 |
+ |
(GGCC)n |
Simple_repeat |
| scaffold9989 |
43595 |
43678 |
+ |
(TTTTAG)n |
Simple_repeat |
| scaffold9989 |
44379 |
44445 |
- |
RS1060 |
Unspecified |
| scaffold9989 |
44761 |
44819 |
+ |
(TTTTGT)n |
Simple_repeat |
| scaffold9989 |
46002 |
46423 |
- |
RS192 |
Unspecified |
| scaffold9989 |
46107 |
46464 |
- |
RS8359 |
Unspecified |
| scaffold9989 |
47018 |
48485 |
- |
RS200 |
Unspecified |
| scaffold9989 |
48485 |
49042 |
- |
PL696 |
Unspecified |
| scaffold9989 |
49046 |
50042 |
- |
RS105 |
Unspecified |
| scaffold9989 |
49909 |
50300 |
+ |
RS1007 |
Unspecified |
| scaffold9989 |
49986 |
50395 |
+ |
RS1007 |
Unspecified |
| scaffold9989 |
50067 |
50933 |
+ |
RS1007 |
Unspecified |
| scaffold9989 |
50300 |
52696 |
+ |
RS869 |
Unspecified |
| scaffold9989 |
53628 |
53732 |
- |
RS832 |
Unspecified |
| scaffold9989 |
53753 |
55066 |
- |
L1-1_GM |
LINE/L1 |
| scaffold9989 |
55310 |
55383 |
- |
Gypsy-25_VV-I |
LTR/Gypsy |
| scaffold9989 |
56676 |
56746 |
+ |
(TAATAT)n |
Simple_repeat |
| scaffold9989 |
57347 |
58292 |
- |
ATIS112A |
DNA/PIF-Harbinger |
| scaffold9989 |
58769 |
58818 |
+ |
(TA)n |
Simple_repeat |
| scaffold9989 |
60074 |
60147 |
+ |
(ATT)n |
Simple_repeat |
| scaffold9989 |
60290 |
60378 |
+ |
(AATA)n |
Simple_repeat |
| scaffold9989 |
60410 |
60442 |
+ |
(A)n |
Simple_repeat |
| scaffold9989 |
60826 |
60883 |
+ |
A-rich |
Low_complexity |
| scaffold9989 |
61279 |
61395 |
- |
MUDRAVI1 |
DNA/MULE-MuDR |
| scaffold9989 |
61675 |
61719 |
- |
HARB-3N1_Mad |
DNA/PIF-Harbinger |
| scaffold9989 |
62109 |
62192 |
+ |
(ATT)n |
Simple_repeat |
| scaffold9989 |
62257 |
62309 |
+ |
(A)n |
Simple_repeat |
| scaffold9989 |
65048 |
65231 |
+ |
MuDR-8_VV |
DNA/MULE-MuDR |
| scaffold9989 |
66625 |
66659 |
+ |
(TTATT)n |
Simple_repeat |
| scaffold9989 |
66952 |
67592 |
+ |
RS7533 |
Unspecified |
| scaffold9989 |
69453 |
69476 |
+ |
(A)n |
Simple_repeat |
| scaffold9989 |
69599 |
69622 |
+ |
(A)n |
Simple_repeat |
| scaffold9989 |
69671 |
69742 |
+ |
(CACCACGCAT)n |
Simple_repeat |
| scaffold9989 |
70256 |
70319 |
+ |
(ACCACCG)n |
Simple_repeat |
| scaffold9989 |
70533 |
70569 |
+ |
(TTTTG)n |
Simple_repeat |
| scaffold9989 |
70703 |
70730 |
+ |
(TTG)n |
Simple_repeat |
| scaffold9989 |
70731 |
70797 |
- |
PL253 |
Unspecified |
| scaffold9989 |
71288 |
71349 |
+ |
(AACACAC)n |
Simple_repeat |
| scaffold9989 |
72233 |
72298 |
+ |
(AATTTT)n |
Simple_repeat |
| scaffold9989 |
72716 |
72821 |
+ |
(TTAGTAT)n |
Simple_repeat |
| scaffold9989 |
72825 |
73023 |
+ |
(ATTTCGT)n |
Simple_repeat |
| scaffold9989 |
73061 |
73731 |
+ |
RS140 |
Unspecified |
| scaffold9989 |
74121 |
74151 |
+ |
GA-rich |
Low_complexity |
| scaffold9989 |
74342 |
74380 |
+ |
A-rich |
Low_complexity |
| scaffold9989 |
75902 |
76114 |
- |
MuDR_A_B |
MuDR_A_B(TransposonPSI) |
| scaffold9989 |
76918 |
76936 |
+ |
(A)n |
Simple_repeat |
| scaffold9989 |
77478 |
77836 |
- |
RS468 |
Unspecified |
| scaffold9989 |
77586 |
77947 |
- |
RS3519 |
Unspecified |
| scaffold9989 |
77949 |
77980 |
- |
RS3519 |
Unspecified |
| scaffold9989 |
78349 |
78766 |
- |
RS8600 |
Unspecified |
| scaffold9989 |
81137 |
81190 |
+ |
(TTAATTG)n |
Simple_repeat |
| scaffold9989 |
82147 |
82553 |
- |
RS8769 |
Unspecified |
| scaffold9989 |
82585 |
82828 |
- |
RS4 |
Unspecified |
| scaffold9989 |
83179 |
83242 |
+ |
(AATTATG)n |
Simple_repeat |
| scaffold9989 |
83220 |
83284 |
+ |
A-rich |
Low_complexity |
| scaffold9989 |
83220 |
83790 |
+ |
A-rich |
Low_complexity |
| scaffold9989 |
83255 |
83790 |
+ |
RS2024 |
Unspecified |
| scaffold9989 |
83803 |
83898 |
- |
PSL |
DNA/CMC-EnSpm |
| scaffold9989 |
84078 |
84143 |
- |
ATENSPM4 |
DNA/CMC-EnSpm |