Carnation DB

Dca12288.1

Annotation

5-exons
f-1
sp|C6SZT2_SOYBN#Putative uncharacterized protein#Glycine max (Soybean) (Glycine hispida)#unknown#GO:0003676;GO:0000166#2F0P0C
Repeat List (scaffold156)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12288.1	55	119	151	32.45	65	76	3e-22
Target_name	Start	End	Length	Cov(%)
sp\|C6SZT2_SOYBN	58	122	146	44.52

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12288.1	56	119	151	29.13	64	69	9e-22
Target_name	Start	End	Length	Cov(%)
Os01t0974701-01	38	101	117	54.7

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold156	Augus-PASA	mRNA	162245	164006	.	-	.	ID=Dca12288.1;Parent=Dca12288
scaffold156	Augus-PASA	exon	162245	162343	.	-	.	ID=Dca12288.1.exon1;Parent=Dca12288.1
scaffold156	Augus-PASA	exon	162476	162582	.	-	.	ID=Dca12288.1.exon2;Parent=Dca12288.1
scaffold156	Augus-PASA	exon	162678	162746	.	-	.	ID=Dca12288.1.exon3;Parent=Dca12288.1
scaffold156	Augustus	exon	163068	163126	.	-	.	ID=Dca12288.1.exon4;Parent=Dca12288.1
scaffold156	Augustus	exon	163885	164006	.	-	.	ID=Dca12288.1.exon5;Parent=Dca12288.1