Carnation DB

Dca12342.1

Annotation

13-exons
f-1
sp|A5BEC7_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_013474#GO:0005622;GO:0003676;GO:0000166;GO:0008270#3F0P1C
AT3G54230.2 | Symbols: SUA | suppressor of abi3-5 | chr3:20073872-20080142 FORWARD LENGTH=1008
Repeat List (scaffold1562)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12342.1	34	628	676	56.8	595	60	1e-168
Target_name	Start	End	Length	Cov(%)
sp\|A5BEC7_VITVI	37	637	1070	56.16

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12342.1	70	626	676	46.44	557	52	2e-138
Target_name	Start	End	Length	Cov(%)
AT3G54230.2	34	616	1008	57.83

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1562	Augustus	mRNA	12355	18484	.	+	.	ID=Dca12342.1;Parent=Dca12342
scaffold1562	Augustus	exon	12355	12371	.	+	.	ID=Dca12342.1.exon1;Parent=Dca12342.1
scaffold1562	Augustus	exon	12699	12830	.	+	.	ID=Dca12342.1.exon2;Parent=Dca12342.1
scaffold1562	Augustus	exon	13303	13554	.	+	.	ID=Dca12342.1.exon3;Parent=Dca12342.1
scaffold1562	Augustus	exon	13636	14074	.	+	.	ID=Dca12342.1.exon4;Parent=Dca12342.1
scaffold1562	Augustus	exon	14158	14229	.	+	.	ID=Dca12342.1.exon5;Parent=Dca12342.1
scaffold1562	Augustus	exon	14309	14401	.	+	.	ID=Dca12342.1.exon6;Parent=Dca12342.1
scaffold1562	Augustus	exon	14489	14640	.	+	.	ID=Dca12342.1.exon7;Parent=Dca12342.1
scaffold1562	Augustus	exon	14855	15008	.	+	.	ID=Dca12342.1.exon8;Parent=Dca12342.1
scaffold1562	Augustus	exon	15395	15479	.	+	.	ID=Dca12342.1.exon9;Parent=Dca12342.1
scaffold1562	Augustus	exon	15561	15652	.	+	.	ID=Dca12342.1.exon10;Parent=Dca12342.1
scaffold1562	Augustus	exon	16975	17151	.	+	.	ID=Dca12342.1.exon11;Parent=Dca12342.1
scaffold1562	Augustus	exon	18040	18226	.	+	.	ID=Dca12342.1.exon12;Parent=Dca12342.1
scaffold1562	Augustus	exon	18306	18484	.	+	.	ID=Dca12342.1.exon13;Parent=Dca12342.1