Carnation DB

Dca1311.1

Annotation

10-exons
f-1
sp|B9IBR0_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_730760#GO:0000166#1F0P0C
sp|Q69ST5_ORYSJ#Os02g0555000 protein#Oryza sativa subsp japonica (Rice)#Name=P0470G10.26#GO:0000166#1F0P0C
Repeat List (scaffold10383)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1311.1	1	295	302	89.73	295	92	8e-160
Target_name	Start	End	Length	Cov(%)
sp\|B9IBR0_POPTR	1	295	301	98

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1311.1	1	295	302	85.43	295	88	5e-154
Target_name	Start	End	Length	Cov(%)
Os02t0555000-01	1	295	305	96.72

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold10383	Augus-PASA	mRNA	3703	7416	.	-	.	ID=Dca1311.1;Parent=Dca1311
scaffold10383	Augus-PASA	exon	3703	3766	.	-	.	ID=Dca1311.1.exon1;Parent=Dca1311.1
scaffold10383	Augus-PASA	exon	4135	4265	.	-	.	ID=Dca1311.1.exon2;Parent=Dca1311.1
scaffold10383	Augus-PASA	exon	4352	4424	.	-	.	ID=Dca1311.1.exon3;Parent=Dca1311.1
scaffold10383	Augus-PASA	exon	4719	4806	.	-	.	ID=Dca1311.1.exon4;Parent=Dca1311.1
scaffold10383	Augus-PASA	exon	4928	5084	.	-	.	ID=Dca1311.1.exon5;Parent=Dca1311.1
scaffold10383	Augus-PASA	exon	5181	5284	.	-	.	ID=Dca1311.1.exon6;Parent=Dca1311.1
scaffold10383	Augus-PASA	exon	5374	5448	.	-	.	ID=Dca1311.1.exon7;Parent=Dca1311.1
scaffold10383	Augus-PASA	exon	6442	6521	.	-	.	ID=Dca1311.1.exon8;Parent=Dca1311.1
scaffold10383	Augus-PASA	exon	6760	6804	.	-	.	ID=Dca1311.1.exon9;Parent=Dca1311.1
scaffold10383	Augustus	exon	7325	7416	.	-	.	ID=Dca1311.1.exon10;Parent=Dca1311.1