Dca1443.1
Annotation
- 3-exons
- f-205
- sp|Q2QP24_ORYSJ#Retrotransposon protein, putative, Ty3-gypsy subclass#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os12g35930#GO:0005634;GO:0003723;GO:0003964;GO:0015074;GO:0006278#2F2P1C
- Repeat List (scaffold1042)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca1443.1 |
22 |
105 |
127 |
22.83 |
84 |
34 |
6e-08
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q2QP24_ORYSJ |
13 |
98 |
1275 |
6.74 |
AtOs (Arabidopsis thaliana & Oryza sativa)
No data
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1042 |
Augustus |
mRNA |
77463 |
79915 |
. |
- |
. |
ID=Dca1443.1;Parent=Dca1443 |
| scaffold1042 |
Augustus |
exon |
77463 |
77480 |
. |
- |
. |
ID=Dca1443.1.exon1;Parent=Dca1443.1 |
| scaffold1042 |
Augustus |
exon |
77593 |
77959 |
. |
- |
. |
ID=Dca1443.1.exon2;Parent=Dca1443.1 |
| scaffold1042 |
Augustus |
exon |
79713 |
79915 |
. |
- |
. |
ID=Dca1443.1.exon3;Parent=Dca1443.1 |
