Dca1501.1
Annotation
- 4-exons
- f-1
- sp|F6H4X2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_12s0028g02670#unknown#0F0P0C
- Os05t0515700-01 Colicin E3, catalytic domain containing protein.
- Repeat List (scaffold1045)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca1501.1 |
1 |
520 |
529 |
49.71 |
520 |
51 |
1e-125
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F6H4X2_VITVI |
20 |
463 |
529 |
83.93 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca1501.1 |
14 |
519 |
529 |
41.96 |
506 |
41 |
1e-97
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os05t0515700-01 |
28 |
542 |
642 |
80.21 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1045 |
Augustus |
mRNA |
45902 |
48656 |
. |
+ |
. |
ID=Dca1501.1;Parent=Dca1501 |
| scaffold1045 |
Augustus |
exon |
45902 |
46126 |
. |
+ |
. |
ID=Dca1501.1.exon1;Parent=Dca1501.1 |
| scaffold1045 |
Augustus |
exon |
46219 |
46398 |
. |
+ |
. |
ID=Dca1501.1.exon2;Parent=Dca1501.1 |
| scaffold1045 |
Augus-PASA |
exon |
47185 |
47866 |
. |
+ |
. |
ID=Dca1501.1.exon3;Parent=Dca1501.1 |
| scaffold1045 |
Augus-PASA |
exon |
48154 |
48656 |
. |
+ |
. |
ID=Dca1501.1.exon4;Parent=Dca1501.1 |
