Dca1622.1
Annotation
- 4-exons
- f-1
- sp|D7TJB4_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0007g02860#GO:0003676;GO:0000166#2F0P0C
- AT5G06210.1 | Symbols: | RNA binding (RRM/RBD/RNP motifs) family protein | chr5:1878497-1879515 FORWARD LENGTH=146
- Repeat List (scaffold105)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca1622.1 |
1 |
128 |
130 |
65.38 |
128 |
66 |
7e-40
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D7TJB4_VITVI |
1 |
128 |
133 |
96.24 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca1622.1 |
1 |
128 |
130 |
60.76 |
128 |
60 |
2e-35
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G06210.1 |
1 |
130 |
146 |
89.04 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold105 |
Augustus |
mRNA |
170489 |
171915 |
. |
+ |
. |
ID=Dca1622.1;Parent=Dca1622 |
| scaffold105 |
Augustus |
exon |
170489 |
170603 |
. |
+ |
. |
ID=Dca1622.1.exon1;Parent=Dca1622.1 |
| scaffold105 |
Augustus |
exon |
171436 |
171504 |
. |
+ |
. |
ID=Dca1622.1.exon2;Parent=Dca1622.1 |
| scaffold105 |
Augustus |
exon |
171591 |
171697 |
. |
+ |
. |
ID=Dca1622.1.exon3;Parent=Dca1622.1 |
| scaffold105 |
Augustus |
exon |
171814 |
171915 |
. |
+ |
. |
ID=Dca1622.1.exon4;Parent=Dca1622.1 |
