Dca1626.1
Annotation
- 3-exons
- f-1
- sp|F6HBV6_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_09s0018g00100#unknown#0F0P0C
- AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr2:15195663-15197156 FORWARD LENGTH=497
- Repeat List (scaffold105)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca1626.1 |
2 |
503 |
551 |
52.81 |
502 |
58 |
3e-166
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F6HBV6_VITVI |
115 |
616 |
638 |
78.68 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca1626.1 |
11 |
469 |
551 |
46.09 |
459 |
55 |
5e-150
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT2G36240.1 |
24 |
483 |
497 |
92.55 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold105 |
Augustus |
mRNA |
214569 |
217081 |
. |
+ |
. |
ID=Dca1626.1;Parent=Dca1626 |
| scaffold105 |
Augustus |
exon |
214569 |
216018 |
. |
+ |
. |
ID=Dca1626.1.exon1;Parent=Dca1626.1 |
| scaffold105 |
Augustus |
exon |
216627 |
216740 |
. |
+ |
. |
ID=Dca1626.1.exon2;Parent=Dca1626.1 |
| scaffold105 |
Augustus |
exon |
216990 |
217081 |
. |
+ |
. |
ID=Dca1626.1.exon3;Parent=Dca1626.1 |
