Carnation DB

Dca1732.1

Annotation

7-exons
f-1
sp|F4NCG3_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
AT5G16890.1 | Symbols: | Exostosin family protein | chr5:5551664-5554741 FORWARD LENGTH=511
Repeat List (scaffold1055)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1732.1	1	1078	1380	27.1	1078	35	7e-178
Target_name	Start	End	Length	Cov(%)
sp\|F4NCG3_BETVU	24	1101	1114	96.76

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1732.1	1080	1369	1380	15.5	290	74	5e-129
Target_name	Start	End	Length	Cov(%)
AT5G16890.1	208	497	511	56.75

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1055	Augustus	mRNA	18242	27267	.	-	.	ID=Dca1732.1;Parent=Dca1732
scaffold1055	Augustus	exon	18242	18373	.	-	.	ID=Dca1732.1.exon1;Parent=Dca1732.1
scaffold1055	Augustus	exon	18460	18528	.	-	.	ID=Dca1732.1.exon2;Parent=Dca1732.1
scaffold1055	Augustus	exon	18774	18884	.	-	.	ID=Dca1732.1.exon3;Parent=Dca1732.1
scaffold1055	Augustus	exon	20614	20752	.	-	.	ID=Dca1732.1.exon4;Parent=Dca1732.1
scaffold1055	Augustus	exon	20930	21193	.	-	.	ID=Dca1732.1.exon5;Parent=Dca1732.1
scaffold1055	Augustus	exon	21300	21457	.	-	.	ID=Dca1732.1.exon6;Parent=Dca1732.1
scaffold1055	Augustus	exon	23998	27267	.	-	.	ID=Dca1732.1.exon7;Parent=Dca1732.1