Dca18046.1
Annotation
- 4-exons
- f-1
- sp|A5BNA8_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_002093#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- sp|Q2QLK1_ORYSJ#Retrotransposon protein, putative, unclassified#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os12g44200#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold19261)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca18046.1 |
1 |
446 |
446 |
56.95 |
446 |
50 |
5e-128
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5BNA8_VITVI |
516 |
1002 |
1109 |
43.91 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca18046.1 |
325 |
446 |
446 |
13.45 |
122 |
45 |
3e-18
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1132 |
1264 |
1401 |
9.49 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold19261 |
Augustus |
mRNA |
1 |
1985 |
. |
- |
. |
ID=Dca18046.1;Parent=Dca18046 |
| scaffold19261 |
Augustus |
exon |
1 |
237 |
. |
- |
. |
ID=Dca18046.1.exon1;Parent=Dca18046.1 |
| scaffold19261 |
Augustus |
exon |
538 |
1096 |
. |
- |
. |
ID=Dca18046.1.exon2;Parent=Dca18046.1 |
| scaffold19261 |
Augustus |
exon |
1188 |
1423 |
. |
- |
. |
ID=Dca18046.1.exon3;Parent=Dca18046.1 |
| scaffold19261 |
Augustus |
exon |
1678 |
1985 |
. |
- |
. |
ID=Dca18046.1.exon4;Parent=Dca18046.1 |
