Dca18371.1
Annotation
- 4-exons
- f-1
- sp|Q2R2I1_ORYSJ#Retrotransposon protein, putative, unclassified#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os11g35740#unknown#0F0P0C
- Repeat List (scaffold1948)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca18371.1 |
31 |
300 |
346 |
41.61 |
270 |
54 |
1e-73
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q2R2I1_ORYSJ |
804 |
1056 |
1064 |
23.77 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca18371.1 |
29 |
257 |
346 |
24.27 |
229 |
33 |
1e-33
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G23160.1 |
294 |
554 |
1262 |
20.68 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1948 |
Augustus |
mRNA |
34389 |
36355 |
. |
+ |
. |
ID=Dca18371.1;Parent=Dca18371 |
| scaffold1948 |
Augustus |
exon |
34389 |
34470 |
. |
+ |
. |
ID=Dca18371.1.exon1;Parent=Dca18371.1 |
| scaffold1948 |
Augustus |
exon |
34955 |
35280 |
. |
+ |
. |
ID=Dca18371.1.exon2;Parent=Dca18371.1 |
| scaffold1948 |
Augustus |
exon |
35432 |
35569 |
. |
+ |
. |
ID=Dca18371.1.exon3;Parent=Dca18371.1 |
| scaffold1948 |
Augustus |
exon |
35861 |
36355 |
. |
+ |
. |
ID=Dca18371.1.exon4;Parent=Dca18371.1 |
