Carnation DB

Dca38019.1

Annotation

9-exons
f-1
sp|F6HLJ8_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0007g06380#unknown#0F0P0C
AT1G51130.1 | Symbols: | Nse4, component of Smc5/6 DNA repair complex | chr1:18939480-18941560 REVERSE LENGTH=403
Repeat List (scaffold4054)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38019.1	350	557	559	16.1	208	39	4e-26
Target_name	Start	End	Length	Cov(%)
sp\|F6HLJ8_VITVI	174	376	380	53.42

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38019.1	418	547	559	10.01	130	44	5e-21
Target_name	Start	End	Length	Cov(%)
AT1G51130.1	290	393	403	25.8

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4054	Augustus	mRNA	11012	15690	.	+	.	ID=Dca38019.1;Parent=Dca38019
scaffold4054	Augustus	exon	11012	11204	.	+	.	ID=Dca38019.1.exon1;Parent=Dca38019.1
scaffold4054	Augustus	exon	11350	11430	.	+	.	ID=Dca38019.1.exon2;Parent=Dca38019.1
scaffold4054	Augustus	exon	12489	12744	.	+	.	ID=Dca38019.1.exon3;Parent=Dca38019.1
scaffold4054	Augustus	exon	12835	12925	.	+	.	ID=Dca38019.1.exon4;Parent=Dca38019.1
scaffold4054	Augustus	exon	13676	13886	.	+	.	ID=Dca38019.1.exon5;Parent=Dca38019.1
scaffold4054	Augustus	exon	13987	14078	.	+	.	ID=Dca38019.1.exon6;Parent=Dca38019.1
scaffold4054	Augustus	exon	14215	14539	.	+	.	ID=Dca38019.1.exon7;Parent=Dca38019.1
scaffold4054	Augustus	exon	15127	15218	.	+	.	ID=Dca38019.1.exon8;Parent=Dca38019.1
scaffold4054	Augustus	exon	15352	15690	.	+	.	ID=Dca38019.1.exon9;Parent=Dca38019.1