Carnation DB

Dca38024.1

Annotation

7-exons
f-1
sp|A5BM72_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_039116#GO:0016021;GO:0016811;GO:0006672#1F1P1C
Os01t0962200-01 Similar to Membrane protein.
Repeat List (scaffold4056)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38024.1	1	285	286	76.57	285	77	1e-134
Target_name	Start	End	Length	Cov(%)
sp\|A5BM72_VITVI	1	285	286	99.65

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38024.1	1	273	286	66.43	273	68	1e-113
Target_name	Start	End	Length	Cov(%)
Os01t0962200-01	3	282	295	94.91

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4056	Augus-PASA	mRNA	5069	8564	.	+	.	ID=Dca38024.1;Parent=Dca38024
scaffold4056	Augus-PASA	exon	5069	5195	.	+	.	ID=Dca38024.1.exon1;Parent=Dca38024.1
scaffold4056	Augus-PASA	exon	6194	6293	.	+	.	ID=Dca38024.1.exon2;Parent=Dca38024.1
scaffold4056	Augus-PASA	exon	6390	6510	.	+	.	ID=Dca38024.1.exon3;Parent=Dca38024.1
scaffold4056	Augus-PASA	exon	6641	6762	.	+	.	ID=Dca38024.1.exon4;Parent=Dca38024.1
scaffold4056	Augus-PASA	exon	7416	7537	.	+	.	ID=Dca38024.1.exon5;Parent=Dca38024.1
scaffold4056	Augus-PASA	exon	7631	7790	.	+	.	ID=Dca38024.1.exon6;Parent=Dca38024.1
scaffold4056	Augus-PASA	exon	8456	8564	.	+	.	ID=Dca38024.1.exon7;Parent=Dca38024.1