Carnation DB

Dca38030.1

Annotation

7-exons
f-1
sp|G5DW73_SILLA#Pentatricopeptide repeat-containing protein#Silene latifolia (White campion) (Bladder campion)#unknown#unknown#0F0P0C
Repeat List (scaffold4057)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38030.1	1	387	387	70.54	387	71	8e-161
Target_name	Start	End	Length	Cov(%)
sp\|G5DW73_SILLA	192	574	594	64.47

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38030.1	1	387	387	60.46	387	61	4e-140
Target_name	Start	End	Length	Cov(%)
AT1G26460.1	217	603	630	61.42

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4057	Augustus	mRNA	3675	7947	.	+	.	ID=Dca38030.1;Parent=Dca38030
scaffold4057	Augustus	exon	3675	3896	.	+	.	ID=Dca38030.1.exon1;Parent=Dca38030.1
scaffold4057	Augustus	exon	3983	4465	.	+	.	ID=Dca38030.1.exon2;Parent=Dca38030.1
scaffold4057	Augustus	exon	5413	5619	.	+	.	ID=Dca38030.1.exon3;Parent=Dca38030.1
scaffold4057	Augustus	exon	6143	6280	.	+	.	ID=Dca38030.1.exon4;Parent=Dca38030.1
scaffold4057	Augustus	exon	6392	6503	.	+	.	ID=Dca38030.1.exon5;Parent=Dca38030.1
scaffold4057	Augustus	exon	7322	7385	.	+	.	ID=Dca38030.1.exon6;Parent=Dca38030.1
scaffold4057	Augustus	exon	7746	7947	.	+	.	ID=Dca38030.1.exon7;Parent=Dca38030.1