Carnation DB

Dca38032.1

Annotation

5-exons
f-1
sp|B9REF3_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_1620960#GO:0043189;GO:0006355#0F1P1C
Os05t0512500-01 CT20 family protein.
Repeat List (scaffold4057)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38032.1	2	124	125	77.6	123	78	1e-41
Target_name	Start	End	Length	Cov(%)
sp\|B9REF3_RICCO	5	129	129	96.89

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38032.1	6	124	125	61.6	119	65	9e-41
Target_name	Start	End	Length	Cov(%)
Os05t0512500-01	4	122	123	96.74

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4057	Augustus	mRNA	16020	19668	.	+	.	ID=Dca38032.1;Parent=Dca38032
scaffold4057	Augustus	exon	16020	16115	.	+	.	ID=Dca38032.1.exon1;Parent=Dca38032.1
scaffold4057	Augustus	exon	16297	16369	.	+	.	ID=Dca38032.1.exon2;Parent=Dca38032.1
scaffold4057	Augustus	exon	18860	18911	.	+	.	ID=Dca38032.1.exon3;Parent=Dca38032.1
scaffold4057	Augustus	exon	18993	19062	.	+	.	ID=Dca38032.1.exon4;Parent=Dca38032.1
scaffold4057	Augustus	exon	19582	19668	.	+	.	ID=Dca38032.1.exon5;Parent=Dca38032.1