Carnation DB

Dca38055.1

Annotation

5-exons
f-1
sp|Q6L3N8_SOLDE#Putative gag-pol polyprotein, identical#Solanum demissum (Wild potato)#ORFNames=SDM1_42t00010#GO:0003676;GO:0008270;GO:0015074#2F1P0C
Repeat List (scaffold406)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38055.1	263	467	1090	7.15	205	39	4e-34
Target_name	Start	End	Length	Cov(%)
sp\|Q6L3N8_SOLDE	773	969	1333	14.77

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38055.1	264	467	1090	7.61	204	40	4e-36
Target_name	Start	End	Length	Cov(%)
Os11t0656500-01	833	1039	1401	14.77

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold406	Augustus	mRNA	165685	173195	.	-	.	ID=Dca38055.1;Parent=Dca38055
scaffold406	Augustus	exon	165685	166869	.	-	.	ID=Dca38055.1.exon1;Parent=Dca38055.1
scaffold406	Augustus	exon	166960	167647	.	-	.	ID=Dca38055.1.exon2;Parent=Dca38055.1
scaffold406	Augustus	exon	170229	170859	.	-	.	ID=Dca38055.1.exon3;Parent=Dca38055.1
scaffold406	Augustus	exon	172277	172491	.	-	.	ID=Dca38055.1.exon4;Parent=Dca38055.1
scaffold406	Augustus	exon	172642	173195	.	-	.	ID=Dca38055.1.exon5;Parent=Dca38055.1