Dca38069.1
Annotation
- 2-exons
- f-1
- sp|O65452_ARATH#LTR retrotransposon like protein#Arabidopsis thaliana (Mouse-ear cress)#Name=AT4g22040#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold4063)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca38069.1 |
1 |
731 |
731 |
48.01 |
731 |
48 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O65452_ARATH |
401 |
1109 |
1109 |
63.93 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca38069.1 |
288 |
711 |
731 |
26.81 |
424 |
46 |
8e-110
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G23160.1 |
152 |
579 |
1262 |
33.91 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4063 |
Augustus |
mRNA |
26333 |
28652 |
. |
- |
. |
ID=Dca38069.1;Parent=Dca38069 |
| scaffold4063 |
Augustus |
exon |
26333 |
27666 |
. |
- |
. |
ID=Dca38069.1.exon1;Parent=Dca38069.1 |
| scaffold4063 |
Augustus |
exon |
27791 |
28652 |
. |
- |
. |
ID=Dca38069.1.exon2;Parent=Dca38069.1 |
