Carnation DB

Dca38075.1

Annotation

10-exons
f-2
sp|B9HCP7_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1122718#GO:0030246;GO:0003824;GO:0005975#2F1P0C
sp|B9SMY8_RICCO#Lyase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0482770#GO:0030246;GO:0016829#2F0P0C
Repeat List (scaffold4067)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38075.1	1	131	453	15.67	131	55	3e-33
Target_name	Start	End	Length	Cov(%)
sp\|B9HCP7_POPTR	115	240	674	18.69

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38075.1	1	131	453	14.12	131	49	5e-24
Target_name	Start	End	Length	Cov(%)
AT4G24430.1	77	204	646	19.81

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4067	Augustus	mRNA	955	4489	.	+	.	ID=Dca38075.1;Parent=Dca38075
scaffold4067	Augustus	exon	955	1089	.	+	.	ID=Dca38075.1.exon1;Parent=Dca38075.1
scaffold4067	Augustus	exon	1199	1318	.	+	.	ID=Dca38075.1.exon2;Parent=Dca38075.1
scaffold4067	Augustus	exon	1410	1545	.	+	.	ID=Dca38075.1.exon3;Parent=Dca38075.1
scaffold4067	Augustus	exon	2738	2844	.	+	.	ID=Dca38075.1.exon4;Parent=Dca38075.1
scaffold4067	Augustus	exon	2943	3027	.	+	.	ID=Dca38075.1.exon5;Parent=Dca38075.1
scaffold4067	Augustus	exon	3274	3376	.	+	.	ID=Dca38075.1.exon6;Parent=Dca38075.1
scaffold4067	Augustus	exon	3522	3681	.	+	.	ID=Dca38075.1.exon7;Parent=Dca38075.1
scaffold4067	Augustus	exon	3777	3893	.	+	.	ID=Dca38075.1.exon8;Parent=Dca38075.1
scaffold4067	Augustus	exon	3974	4100	.	+	.	ID=Dca38075.1.exon9;Parent=Dca38075.1
scaffold4067	Augustus	exon	4217	4489	.	+	.	ID=Dca38075.1.exon10;Parent=Dca38075.1