Carnation DB

Dca38083.1

Annotation

5-exons
f-1
sp|G9FIF2_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0004190;GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006508;GO:0006278#4F3P0C
sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
Repeat List (scaffold4068)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38083.1	4	664	769	47.59	661	45	0
Target_name	Start	End	Length	Cov(%)
sp\|G9FIF2_BETVU	277	1093	1553	52.6

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38083.1	137	565	769	22.88	429	37	9e-85
Target_name	Start	End	Length	Cov(%)
Os12t0142900-02	128	602	707	67.18

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4068	Augustus	mRNA	26942	31372	.	-	.	ID=Dca38083.1;Parent=Dca38083
scaffold4068	Augustus	exon	26942	27255	.	-	.	ID=Dca38083.1.exon1;Parent=Dca38083.1
scaffold4068	Augustus	exon	29024	29311	.	-	.	ID=Dca38083.1.exon2;Parent=Dca38083.1
scaffold4068	Augustus	exon	29453	29756	.	-	.	ID=Dca38083.1.exon3;Parent=Dca38083.1
scaffold4068	Augustus	exon	29883	31021	.	-	.	ID=Dca38083.1.exon4;Parent=Dca38083.1
scaffold4068	Augustus	exon	31108	31372	.	-	.	ID=Dca38083.1.exon5;Parent=Dca38083.1