Carnation DB

Dca38215.1

Annotation

8-exons
f-1
sp|B9HQH6_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_821016#GO:0004553;GO:0005975#1F1P0C
Os03t0749500-01 Similar to Exo-beta-glucanase.
Repeat List (scaffold409)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38215.1	1	630	631	77.49	630	78	0
Target_name	Start	End	Length	Cov(%)
sp\|B9HQH6_POPTR	1	626	627	99.84

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38215.1	32	628	631	72.1	597	77	0
Target_name	Start	End	Length	Cov(%)
Os03t0749500-01	28	623	627	95.05

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold409	Augustus	mRNA	13217	17174	.	+	.	ID=Dca38215.1;Parent=Dca38215
scaffold409	Augustus	exon	13217	13448	.	+	.	ID=Dca38215.1.exon1;Parent=Dca38215.1
scaffold409	Augustus	exon	14391	14595	.	+	.	ID=Dca38215.1.exon2;Parent=Dca38215.1
scaffold409	Augus-PASA	exon	14723	14959	.	+	.	ID=Dca38215.1.exon3;Parent=Dca38215.1
scaffold409	Augus-PASA	exon	15580	15823	.	+	.	ID=Dca38215.1.exon4;Parent=Dca38215.1
scaffold409	Augus-PASA	exon	15921	16025	.	+	.	ID=Dca38215.1.exon5;Parent=Dca38215.1
scaffold409	Augus-PASA	exon	16114	16296	.	+	.	ID=Dca38215.1.exon6;Parent=Dca38215.1
scaffold409	Augus-PASA	exon	16384	16588	.	+	.	ID=Dca38215.1.exon7;Parent=Dca38215.1
scaffold409	Augus-PASA	exon	16690	17174	.	+	.	ID=Dca38215.1.exon8;Parent=Dca38215.1