Carnation DB

Dca38292.1

Annotation

5-exons
f-1
sp|B9H4R7_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_558510#GO:0003676;GO:0000166#2F0P0C
AT5G10350.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr5:3255674-3257746 REVERSE LENGTH=217
Repeat List (scaffold41)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38292.1	1	200	213	78.87	200	82	6e-90
Target_name	Start	End	Length	Cov(%)
sp\|B9H4R7_POPTR	1	203	218	93.11

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38292.1	1	200	213	72.3	200	76	2e-82
Target_name	Start	End	Length	Cov(%)
AT5G10350.1	1	202	217	93.08

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold41	Augustus	mRNA	126821	130249	.	+	.	ID=Dca38292.1;Parent=Dca38292
scaffold41	Augustus	exon	126821	126928	.	+	.	ID=Dca38292.1.exon1;Parent=Dca38292.1
scaffold41	Augustus	exon	127051	127153	.	+	.	ID=Dca38292.1.exon2;Parent=Dca38292.1
scaffold41	Augustus	exon	127755	127822	.	+	.	ID=Dca38292.1.exon3;Parent=Dca38292.1
scaffold41	Augustus	exon	129779	129970	.	+	.	ID=Dca38292.1.exon4;Parent=Dca38292.1
scaffold41	Augustus	exon	130079	130249	.	+	.	ID=Dca38292.1.exon5;Parent=Dca38292.1
scaffold41	Augustus	mRNA	129779	130249	.	+	.	ID=Dca38292.2;Parent=Dca38292
scaffold41	Augustus	exon	129779	129970	.	+	.	ID=Dca38292.2.exon1;Parent=Dca38292.2
scaffold41	Augustus	exon	130079	130249	.	+	.	ID=Dca38292.2.exon2;Parent=Dca38292.2