Carnation DB

Dca38297.1

Annotation

10-exons
f-1
sp|B9HFF3_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_819808#GO:0016021;GO:0005524;GO:0004674#2F0P1C
AT5G10290.1 | Symbols: | leucine-rich repeat transmembrane protein kinase family protein | chr5:3235462-3238171 REVERSE LENGTH=613
Repeat List (scaffold41)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38297.1	1	609	609	78.32	609	79	0
Target_name	Start	End	Length	Cov(%)
sp\|B9HFF3_POPTR	4	611	611	99.5

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38297.1	2	609	609	74.38	608	75	0
Target_name	Start	End	Length	Cov(%)
AT5G10290.1	8	613	613	98.85

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold41	Augustus	mRNA	149237	152619	.	+	.	ID=Dca38297.1;Parent=Dca38297
scaffold41	Augustus	exon	149237	149309	.	+	.	ID=Dca38297.1.exon1;Parent=Dca38297.1
scaffold41	Augus-PASA	exon	149533	149668	.	+	.	ID=Dca38297.1.exon2;Parent=Dca38297.1
scaffold41	Augus-PASA	exon	149761	149832	.	+	.	ID=Dca38297.1.exon3;Parent=Dca38297.1
scaffold41	Augus-PASA	exon	150452	150595	.	+	.	ID=Dca38297.1.exon4;Parent=Dca38297.1
scaffold41	Augus-PASA	exon	150706	150777	.	+	.	ID=Dca38297.1.exon5;Parent=Dca38297.1
scaffold41	Augus-PASA	exon	150861	150926	.	+	.	ID=Dca38297.1.exon6;Parent=Dca38297.1
scaffold41	Augustus	exon	151010	151080	.	+	.	ID=Dca38297.1.exon7;Parent=Dca38297.1
scaffold41	Augustus	exon	151217	151702	.	+	.	ID=Dca38297.1.exon8;Parent=Dca38297.1
scaffold41	Augustus	exon	151813	152207	.	+	.	ID=Dca38297.1.exon9;Parent=Dca38297.1
scaffold41	Augustus	exon	152305	152619	.	+	.	ID=Dca38297.1.exon10;Parent=Dca38297.1