Dca38356.1
Annotation
- 3-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold4100)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca38356.1 |
18 |
727 |
727 |
49.93 |
710 |
45 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
7 |
815 |
1501 |
53.89 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca38356.1 |
285 |
727 |
727 |
22.42 |
443 |
37 |
3e-81
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0142900-02 |
55 |
504 |
707 |
63.64 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4100 |
Augustus |
mRNA |
1392 |
5156 |
. |
+ |
. |
ID=Dca38356.1;Parent=Dca38356 |
| scaffold4100 |
Augustus |
exon |
1392 |
1787 |
. |
+ |
. |
ID=Dca38356.1.exon1;Parent=Dca38356.1 |
| scaffold4100 |
Augustus |
exon |
1960 |
3238 |
. |
+ |
. |
ID=Dca38356.1.exon2;Parent=Dca38356.1 |
| scaffold4100 |
Augustus |
exon |
4648 |
5156 |
. |
+ |
. |
ID=Dca38356.1.exon3;Parent=Dca38356.1 |
