Carnation DB

Dca4260.1

Annotation

7-exons
f-1
sp|A5BSJ3_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_008285#GO:0003723;GO:0003964;GO:0015074;GO:0006278#2F2P0C
Os08t0202300-03 Reverse transcriptase domain containing protein.
Repeat List (scaffold11581)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4260.1	2	136	273	31.86	135	65	4e-49
Target_name	Start	End	Length	Cov(%)
sp\|A5BSJ3_VITVI	1195	1329	2237	6.03

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4260.1	30	138	273	11.72	109	30	5e-07
Target_name	Start	End	Length	Cov(%)
Os08t0202300-03	5	112	591	18.27

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold11581	Augustus	mRNA	9181	11542	.	+	.	ID=Dca4260.1;Parent=Dca4260
scaffold11581	Augustus	exon	9181	9590	.	+	.	ID=Dca4260.1.exon1;Parent=Dca4260.1
scaffold11581	Augustus	exon	10126	10171	.	+	.	ID=Dca4260.1.exon2;Parent=Dca4260.1
scaffold11581	Augustus	exon	10271	10357	.	+	.	ID=Dca4260.1.exon3;Parent=Dca4260.1
scaffold11581	Augustus	exon	10836	10874	.	+	.	ID=Dca4260.1.exon4;Parent=Dca4260.1
scaffold11581	Augustus	exon	10967	11047	.	+	.	ID=Dca4260.1.exon5;Parent=Dca4260.1
scaffold11581	Augustus	exon	11135	11253	.	+	.	ID=Dca4260.1.exon6;Parent=Dca4260.1
scaffold11581	Augustus	exon	11503	11542	.	+	.	ID=Dca4260.1.exon7;Parent=Dca4260.1