Dca5020.1
Annotation
- 3-exons
- f-1
- sp|A5AWA1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_043610#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- sp|O22175_ARATH#Putative retroelement pol polyprotein#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g23330#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold1191)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5020.1 |
1 |
312 |
361 |
43.76 |
312 |
43 |
4e-82
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5AWA1_VITVI |
1127 |
1497 |
1498 |
24.76 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5020.1 |
2 |
283 |
361 |
32.68 |
282 |
38 |
9e-60
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G23160.1 |
229 |
544 |
1262 |
25.03 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1191 |
Augustus |
mRNA |
79950 |
81223 |
. |
+ |
. |
ID=Dca5020.1;Parent=Dca5020 |
| scaffold1191 |
Augustus |
exon |
79950 |
80641 |
. |
+ |
. |
ID=Dca5020.1.exon1;Parent=Dca5020.1 |
| scaffold1191 |
Augustus |
exon |
80744 |
80886 |
. |
+ |
. |
ID=Dca5020.1.exon2;Parent=Dca5020.1 |
| scaffold1191 |
Augustus |
exon |
80973 |
81223 |
. |
+ |
. |
ID=Dca5020.1.exon3;Parent=Dca5020.1 |
