Dca5102.1
Annotation
- 3-exons
- f-1
- sp|Q94H40_ORYSJ#Putative reverse transcriptase#Oryza sativa subsp japonica (Rice)#Name=OSJNBa0077G22.5#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Repeat List (scaffold11957)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5102.1 |
14 |
212 |
304 |
28.61 |
199 |
39 |
4e-38
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q94H40_ORYSJ |
273 |
492 |
1185 |
18.56 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5102.1 |
38 |
149 |
304 |
13.81 |
112 |
38 |
1e-15
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0484800-00 |
350 |
461 |
857 |
13.06 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold11957 |
Augustus |
mRNA |
5147 |
6458 |
. |
+ |
. |
ID=Dca5102.1;Parent=Dca5102 |
| scaffold11957 |
Augustus |
exon |
5147 |
5597 |
. |
+ |
. |
ID=Dca5102.1.exon1;Parent=Dca5102.1 |
| scaffold11957 |
Augustus |
exon |
5808 |
5984 |
. |
+ |
. |
ID=Dca5102.1.exon2;Parent=Dca5102.1 |
| scaffold11957 |
Augustus |
exon |
6172 |
6458 |
. |
+ |
. |
ID=Dca5102.1.exon3;Parent=Dca5102.1 |
