Carnation DB

Dca5109.1

Annotation

8-exons
f-1
sp|F6HNV5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_13s0019g02000#GO:0003723#1F0P0C
Os01t0844800-01 Similar to Pumilio RBD (Fragment).
Repeat List (scaffold1196)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5109.1	11	894	898	61.69	884	52	0
Target_name	Start	End	Length	Cov(%)
sp\|F6HNV5_VITVI	1	1055	1055	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5109.1	32	894	898	51.78	863	45	0
Target_name	Start	End	Length	Cov(%)
Os01t0844800-01	49	1060	1061	95.38

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1196	Augustus	mRNA	38730	44256	.	-	.	ID=Dca5109.1;Parent=Dca5109
scaffold1196	Augustus	exon	38730	38779	.	-	.	ID=Dca5109.1.exon1;Parent=Dca5109.1
scaffold1196	Augustus	exon	39293	39467	.	-	.	ID=Dca5109.1.exon2;Parent=Dca5109.1
scaffold1196	Augustus	exon	39654	39848	.	-	.	ID=Dca5109.1.exon3;Parent=Dca5109.1
scaffold1196	Augustus	exon	40504	40614	.	-	.	ID=Dca5109.1.exon4;Parent=Dca5109.1
scaffold1196	Augustus	exon	40706	40918	.	-	.	ID=Dca5109.1.exon5;Parent=Dca5109.1
scaffold1196	Augustus	exon	41376	41517	.	-	.	ID=Dca5109.1.exon6;Parent=Dca5109.1
scaffold1196	Augustus	exon	41707	42881	.	-	.	ID=Dca5109.1.exon7;Parent=Dca5109.1
scaffold1196	Augustus	exon	43621	44256	.	-	.	ID=Dca5109.1.exon8;Parent=Dca5109.1