Dca5298.1
Annotation
- 4-exons
- f-1
- sp|C5Y2T5_SORBI#Putative uncharacterized protein Sb05g018930#Sorghum bicolor (Sorghum) (Sorghum vulgare)#Name=Sb05g018930#unknown#0F0P0C
- sp|Q6ATH4_ORYSJ#Putative polyprotein#Oryza sativa subsp japonica (Rice)#Name=OSJNBa0093E24.7#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold12008)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5298.1 |
26 |
326 |
327 |
46.48 |
301 |
42 |
2e-59
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|C5Y2T5_SORBI |
260 |
619 |
619 |
58.15 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5298.1 |
52 |
187 |
327 |
20.48 |
136 |
39 |
4e-24
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| ATMG00810.1 |
2 |
175 |
240 |
72.5 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold12008 |
Augustus |
mRNA |
4261 |
6870 |
. |
- |
. |
ID=Dca5298.1;Parent=Dca5298 |
| scaffold12008 |
Augustus |
exon |
4261 |
4820 |
. |
- |
. |
ID=Dca5298.1.exon1;Parent=Dca5298.1 |
| scaffold12008 |
Augustus |
exon |
4924 |
5257 |
. |
- |
. |
ID=Dca5298.1.exon2;Parent=Dca5298.1 |
| scaffold12008 |
Augustus |
exon |
5934 |
5949 |
. |
- |
. |
ID=Dca5298.1.exon3;Parent=Dca5298.1 |
| scaffold12008 |
Augustus |
exon |
6797 |
6870 |
. |
- |
. |
ID=Dca5298.1.exon4;Parent=Dca5298.1 |
