Carnation DB

Dca5301.1

Annotation

22-exons
f-1
sp|B8AAP3_ORYSI#Putative uncharacterized protein#Oryza sativa subsp indica (Rice)#ORFNames=OsI_02530#unknown#0F0P0C
AT1G49040.1 | Symbols: SCD1 | stomatal cytokinesis defective / SCD1 protein (SCD1) | chr1:18139419-18148826 REVERSE LENGTH=1187
Repeat List (scaffold1201)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5301.1	4	1074	1151	47.43	1071	48	0
Target_name	Start	End	Length	Cov(%)
sp\|B8AAP3_ORYSI	5	1115	1118	99.37

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5301.1	1	205	1151	10.42	205	59	3e-62
Target_name	Start	End	Length	Cov(%)
AT1G49040.1	1	205	1187	17.27

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1201	Augustus	mRNA	28721	44852	.	-	.	ID=Dca5301.1;Parent=Dca5301
scaffold1201	Augustus	exon	28721	28803	.	-	.	ID=Dca5301.1.exon1;Parent=Dca5301.1
scaffold1201	Augustus	exon	29025	29169	.	-	.	ID=Dca5301.1.exon2;Parent=Dca5301.1
scaffold1201	Augustus	exon	29324	30212	.	-	.	ID=Dca5301.1.exon3;Parent=Dca5301.1
scaffold1201	Augustus	exon	30818	30882	.	-	.	ID=Dca5301.1.exon4;Parent=Dca5301.1
scaffold1201	Augustus	exon	30971	31170	.	-	.	ID=Dca5301.1.exon5;Parent=Dca5301.1
scaffold1201	Augustus	exon	31868	32126	.	-	.	ID=Dca5301.1.exon6;Parent=Dca5301.1
scaffold1201	Augustus	exon	32387	32470	.	-	.	ID=Dca5301.1.exon7;Parent=Dca5301.1
scaffold1201	Augustus	exon	32572	32629	.	-	.	ID=Dca5301.1.exon8;Parent=Dca5301.1
scaffold1201	Augustus	exon	32914	32961	.	-	.	ID=Dca5301.1.exon9;Parent=Dca5301.1
scaffold1201	Augustus	exon	33983	34140	.	-	.	ID=Dca5301.1.exon10;Parent=Dca5301.1
scaffold1201	Augustus	exon	34299	34349	.	-	.	ID=Dca5301.1.exon11;Parent=Dca5301.1
scaffold1201	Augustus	exon	34447	34520	.	-	.	ID=Dca5301.1.exon12;Parent=Dca5301.1
scaffold1201	Augustus	exon	34620	34695	.	-	.	ID=Dca5301.1.exon13;Parent=Dca5301.1
scaffold1201	Augustus	exon	35506	35609	.	-	.	ID=Dca5301.1.exon14;Parent=Dca5301.1
scaffold1201	Augustus	exon	35703	35898	.	-	.	ID=Dca5301.1.exon15;Parent=Dca5301.1
scaffold1201	Augustus	exon	36365	36448	.	-	.	ID=Dca5301.1.exon16;Parent=Dca5301.1
scaffold1201	Augustus	exon	36618	36672	.	-	.	ID=Dca5301.1.exon17;Parent=Dca5301.1
scaffold1201	Augustus	exon	37290	37504	.	-	.	ID=Dca5301.1.exon18;Parent=Dca5301.1
scaffold1201	Augustus	exon	40731	40869	.	-	.	ID=Dca5301.1.exon19;Parent=Dca5301.1
scaffold1201	Augustus	exon	41447	41648	.	-	.	ID=Dca5301.1.exon20;Parent=Dca5301.1
scaffold1201	Augustus	exon	42064	42157	.	-	.	ID=Dca5301.1.exon21;Parent=Dca5301.1
scaffold1201	Augustus	exon	44676	44852	.	-	.	ID=Dca5301.1.exon22;Parent=Dca5301.1