Dca5307.1
Annotation
- 3-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Os09t0122300-01 Similar to Zinc knuckle family protein.
- Repeat List (scaffold12014)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5307.1 |
320 |
405 |
408 |
13.97 |
86 |
67 |
8e-26
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
788 |
873 |
1717 |
5 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5307.1 |
146 |
226 |
408 |
6.86 |
81 |
35 |
4e-09
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0292200-01 |
98 |
177 |
192 |
41.66 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold12014 |
Augustus |
mRNA |
6176 |
8190 |
. |
+ |
. |
ID=Dca5307.1;Parent=Dca5307 |
| scaffold12014 |
Augustus |
exon |
6176 |
6860 |
. |
+ |
. |
ID=Dca5307.1.exon1;Parent=Dca5307.1 |
| scaffold12014 |
Augustus |
exon |
6965 |
7203 |
. |
+ |
. |
ID=Dca5307.1.exon2;Parent=Dca5307.1 |
| scaffold12014 |
Augustus |
exon |
7888 |
8190 |
. |
+ |
. |
ID=Dca5307.1.exon3;Parent=Dca5307.1 |
