Dca5334.1
Annotation
- 4-exons
- f-1
- sp|B9MYB7_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_594614#GO:0005634;GO:0005525;GO:0003924;GO:0042254#2F1P1C
- sp|B9RU90_RICCO#Ribosome biogenesis protein bms1, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1635820#GO:0005634;GO:0005525;GO:0003924;GO:0042254#2F1P1C
- Repeat List (scaffold1203)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5334.1 |
84 |
255 |
258 |
36.04 |
172 |
50 |
3e-30
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9MYB7_POPTR |
527 |
712 |
1181 |
15.74 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5334.1 |
83 |
258 |
258 |
30.62 |
176 |
39 |
8e-25
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G06720.1 |
500 |
702 |
1147 |
17.69 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1203 |
Augustus |
mRNA |
35371 |
37986 |
. |
- |
. |
ID=Dca5334.1;Parent=Dca5334 |
| scaffold1203 |
Augustus |
exon |
35371 |
35673 |
. |
- |
. |
ID=Dca5334.1.exon1;Parent=Dca5334.1 |
| scaffold1203 |
Augustus |
exon |
35784 |
35933 |
. |
- |
. |
ID=Dca5334.1.exon2;Parent=Dca5334.1 |
| scaffold1203 |
Augustus |
exon |
36098 |
36230 |
. |
- |
. |
ID=Dca5334.1.exon3;Parent=Dca5334.1 |
| scaffold1203 |
Augustus |
exon |
37796 |
37986 |
. |
- |
. |
ID=Dca5334.1.exon4;Parent=Dca5334.1 |
