Carnation DB

Dca5335.1

Annotation

12-exons
f-1
sp|D7TQV8_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0040g00760#GO:0005524;GO:0004674#2F0P0C
AT2G40860.1 | Symbols: | protein kinase family protein / protein phosphatase 2C ( PP2C) family protein | chr2:17053747-17057108 REVERSE LENGTH=658
Repeat List (scaffold1203)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5335.1	8	616	616	65.9	609	66	0
Target_name	Start	End	Length	Cov(%)
sp\|D7TQV8_VITVI	39	659	659	94.23

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5335.1	8	616	616	62.01	609	62	0
Target_name	Start	End	Length	Cov(%)
AT2G40860.1	39	658	658	94.22

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1203	Augustus	mRNA	50084	58139	.	+	.	ID=Dca5335.1;Parent=Dca5335
scaffold1203	Augustus	exon	50084	50105	.	+	.	ID=Dca5335.1.exon1;Parent=Dca5335.1
scaffold1203	Augustus	exon	50925	51042	.	+	.	ID=Dca5335.1.exon2;Parent=Dca5335.1
scaffold1203	Augustus	exon	51543	51709	.	+	.	ID=Dca5335.1.exon3;Parent=Dca5335.1
scaffold1203	Augustus	exon	52061	52110	.	+	.	ID=Dca5335.1.exon4;Parent=Dca5335.1
scaffold1203	Augustus	exon	53145	53368	.	+	.	ID=Dca5335.1.exon5;Parent=Dca5335.1
scaffold1203	Augustus	exon	53896	53947	.	+	.	ID=Dca5335.1.exon6;Parent=Dca5335.1
scaffold1203	Augustus	exon	54915	55461	.	+	.	ID=Dca5335.1.exon7;Parent=Dca5335.1
scaffold1203	Augustus	exon	56230	56299	.	+	.	ID=Dca5335.1.exon8;Parent=Dca5335.1
scaffold1203	Augustus	exon	56391	56595	.	+	.	ID=Dca5335.1.exon9;Parent=Dca5335.1
scaffold1203	Augustus	exon	56669	56773	.	+	.	ID=Dca5335.1.exon10;Parent=Dca5335.1
scaffold1203	Augus-PASA	exon	57308	57403	.	+	.	ID=Dca5335.1.exon11;Parent=Dca5335.1
scaffold1203	Augus-PASA	exon	57945	58139	.	+	.	ID=Dca5335.1.exon12;Parent=Dca5335.1