Dca53549.1
Annotation
- 3-exons
- f-1
- sp|A5AUE6_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_021034#GO:0005524;GO:0003676;GO:0004674;GO:0005529;GO:0015074;GO:0048544#4F2P0C
- Os11t0656500-01 Integrase, catalytic core domain containing protein.
- Repeat List (scaffold718)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca53549.1 |
34 |
900 |
904 |
58.73 |
867 |
58 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5AUE6_VITVI |
207 |
1109 |
2026 |
44.57 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca53549.1 |
73 |
887 |
904 |
31.63 |
815 |
31 |
1e-109
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
472 |
1379 |
1401 |
64.81 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold718 |
Augustus |
mRNA |
19134 |
22134 |
. |
+ |
. |
ID=Dca53549.1;Parent=Dca53549 |
| scaffold718 |
Augustus |
exon |
19134 |
19920 |
. |
+ |
. |
ID=Dca53549.1.exon1;Parent=Dca53549.1 |
| scaffold718 |
Augustus |
exon |
20069 |
21065 |
. |
+ |
. |
ID=Dca53549.1.exon2;Parent=Dca53549.1 |
| scaffold718 |
Augustus |
exon |
21204 |
22134 |
. |
+ |
. |
ID=Dca53549.1.exon3;Parent=Dca53549.1 |
