Carnation DB

Dca53631.1

Annotation

5-exons
f-1
sp|B9HXA3_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_565466#unknown#0F0P0C
AT5G30495.2 | Symbols: | Fcf2 pre-rRNA processing protein | chr5:11380190-11381391 FORWARD LENGTH=196
Repeat List (scaffold72)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca53631.1	7	195	195	62.56	189	64	5e-64
Target_name	Start	End	Length	Cov(%)
sp\|B9HXA3_POPTR	1	190	190	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca53631.1	1	186	195	58.97	186	62	1e-62
Target_name	Start	End	Length	Cov(%)
AT5G30495.2	1	188	196	95.91

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold72	Augus-PASA	mRNA	191814	193519	.	-	.	ID=Dca53631.1;Parent=Dca53631
scaffold72	Augus-PASA	exon	191814	191922	.	-	.	ID=Dca53631.1.exon1;Parent=Dca53631.1
scaffold72	Augus-PASA	exon	192013	192125	.	-	.	ID=Dca53631.1.exon2;Parent=Dca53631.1
scaffold72	Augus-PASA	exon	192206	192283	.	-	.	ID=Dca53631.1.exon3;Parent=Dca53631.1
scaffold72	Augus-PASA	exon	193082	193142	.	-	.	ID=Dca53631.1.exon4;Parent=Dca53631.1
scaffold72	Augus-PASA	exon	193293	193519	.	-	.	ID=Dca53631.1.exon5;Parent=Dca53631.1