Carnation DB

Dca5390.1

Annotation

5-exons
f-1
sp|F6HKM0_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0007g03180#GO:0016021;GO:0005524;GO:0042626#2F0P1C
sp|B9SWF7_RICCO#Abc transporter, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0292850#GO:0016021;GO:0005524;GO:0008559#2F0P1C
Repeat List (scaffold12052)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5390.1	184	372	385	29.09	189	59	4e-52
Target_name	Start	End	Length	Cov(%)
sp\|F6HKM0_VITVI	69	259	629	30.36

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5390.1	183	372	385	24.15	190	48	2e-47
Target_name	Start	End	Length	Cov(%)
AT5G03910.1	70	263	634	30.59

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold12052	Augustus	mRNA	5311	12008	.	+	.	ID=Dca5390.1;Parent=Dca5390
scaffold12052	Augustus	exon	5311	5694	.	+	.	ID=Dca5390.1.exon1;Parent=Dca5390.1
scaffold12052	Augustus	exon	5794	5964	.	+	.	ID=Dca5390.1.exon2;Parent=Dca5390.1
scaffold12052	Augustus	exon	10571	10933	.	+	.	ID=Dca5390.1.exon3;Parent=Dca5390.1
scaffold12052	Augustus	exon	11689	11775	.	+	.	ID=Dca5390.1.exon4;Parent=Dca5390.1
scaffold12052	Augustus	exon	11856	12008	.	+	.	ID=Dca5390.1.exon5;Parent=Dca5390.1