Carnation DB

Dca5441.1

Annotation

12-exons
f-1
sp|F6I0Q2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_03s0038g04040#GO:0004046;GO:0008237;GO:0006520;GO:0006508#2F2P0C
AT4G38220.2 | Symbols: | Peptidase M20/M25/M40 family protein | chr4:17925251-17926919 FORWARD LENGTH=433
Repeat List (scaffold12085)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5441.1	1	102	1025	7.02	102	71	4e-37
Target_name	Start	End	Length	Cov(%)
sp\|F6I0Q2_VITVI	377	478	478	21.33

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5441.1	1	102	1025	6.63	102	67	2e-34
Target_name	Start	End	Length	Cov(%)
AT4G38220.2	335	433	433	22.86

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold12085	Augustus	mRNA	4194	15297	.	+	.	ID=Dca5441.1;Parent=Dca5441
scaffold12085	Augustus	exon	4194	4388	.	+	.	ID=Dca5441.1.exon1;Parent=Dca5441.1
scaffold12085	Augustus	exon	4843	4952	.	+	.	ID=Dca5441.1.exon2;Parent=Dca5441.1
scaffold12085	Augustus	exon	5733	6024	.	+	.	ID=Dca5441.1.exon3;Parent=Dca5441.1
scaffold12085	Augustus	exon	6166	6618	.	+	.	ID=Dca5441.1.exon4;Parent=Dca5441.1
scaffold12085	Augustus	exon	7850	8302	.	+	.	ID=Dca5441.1.exon5;Parent=Dca5441.1
scaffold12085	Augustus	exon	9525	9764	.	+	.	ID=Dca5441.1.exon6;Parent=Dca5441.1
scaffold12085	Augustus	exon	10739	10848	.	+	.	ID=Dca5441.1.exon7;Parent=Dca5441.1
scaffold12085	Augustus	exon	12117	12408	.	+	.	ID=Dca5441.1.exon8;Parent=Dca5441.1
scaffold12085	Augustus	exon	12548	13000	.	+	.	ID=Dca5441.1.exon9;Parent=Dca5441.1
scaffold12085	Augustus	exon	14154	14291	.	+	.	ID=Dca5441.1.exon10;Parent=Dca5441.1
scaffold12085	Augustus	exon	14809	15048	.	+	.	ID=Dca5441.1.exon11;Parent=Dca5441.1
scaffold12085	Augustus	exon	15196	15297	.	+	.	ID=Dca5441.1.exon12;Parent=Dca5441.1